Near-optimal RNA-Seq quantification
RNA coding potential assessment tool
BBMap short read aligner, and other bioinformatic tools.
High-performance read alignment, quantification and mutation discovery
Molecular dynamics by NMR data analysis
The UEA sRNA Workbench
Comprehensive analysis of small RNA sequencing data
Splicing Prediction in Consensus Element
PCR primers / probes design from multiple & degenerate sequences
Fusion gene detection pipeline bundled into a Singularity container.
Short-read de novo assembler that identifies chimeric contigs.
R code/package for virus small RNA sequence data
cellPAINT allows users to create living illustrations of biology.
Somatic fusion-genes finder for RNA-seq data
Identification of pathogenic microorganisms in diagnostic samples
A de novo local assembler for paired reads
Hybrid Lineage Transcriptome Explorer
CusVarDB generated variant protein database from NGS-datasets
tumor epigenetic database
Fast ribosomal RNA detector and annotator
RNA editing detection by NGS data
Hadoop spliced read aligner for RNA-seq data