SPiCEv2.1

SPiCE is no longer maintained. To access the tool's predictions, please use SPiP, accessible at : https://sourceforge.net/projects/splicing-prediction-pipeline/ or https://github.com/raphaelleman/SPiP

If you have questions, please contact me to: r.leman@baclesse.unicancer.fr or raphael.leman@orange.fr

v2.1.5 (05/2019) + corr (01/2020):
Fix bug for linux version
v2.1.4 (03/2019):
Proxy management (only for Windows version)
v2.1.3 (07/2018):
correction bug for first 3' ss
import vcf file
v2.1.2 (06/2018):
Import duplication
Simplify import of deletion with one nucleotide
Use tryCatch
Improving web api connection check

Features

Prediction
Variants
splice
RNA
Consensus region

Project Samples

Project Activity

See All Activity >

License

MIT License

Follow SPiCEv2.1

SPiCEv2.1 Web Site

Other Useful Business Software

$300 Free Credits for Your Google Cloud Projects

Start building on Google Cloud with $300 in free credits. No commitment, no credit card required until you're ready to scale.

Launch your next project with $300 in free Google Cloud credits—no strings attached. Test, build, and deploy without risk. Use your credits across the entire Google Cloud platform to find what works best for your needs. After your credits are used, continue with always-free tier services. Only pay when you're ready to scale. Sign up in minutes and start exploring.

Start Free Trial

Rate This Project

User Reviews

Be the first to post a review of SPiCEv2.1!

Additional Project Details

Operating Systems

Linux, Windows

Intended Audience

Science/Research

User Interface

Programming Language

S/R

Related Categories

S/R Bio-Informatics Software

Registered

2018-02-02

Similar Business Software

OmnibusX

In the world of biological data science, navigating vast and complex datasets can be a daunting task. Our software toolkit is designed to empower you by accelerating analysis, promoting accessibility, and providing comprehensive visualization tools to help you make sense of these intricate...

See Software
GenomeBrowse

This free tool delivers stunning visualizations of your genomic data that give you the power to see what is occurring at each base pair in your samples. GenomeBrowse runs as a native desktop application on your computer. No longer do you have to sacrifice speed and interface quality to obtain a...

See Software
Geneious

Geneious Prime makes bioinformatics accessible by transforming raw data into visualizations that make sequence analysis intuitive and user-friendly. Simple sequence assembly and easy editing of contigs. Automatic annotation for gene prediction, motifs, translation, and variant calling. Genotype...

See Software
MEGA

MEGA (Molecular Evolutionary Genetics Analysis) is a powerful and user-friendly software suite designed for analyzing DNA and protein sequence data from species and populations. It facilitates both automatic and manual sequence alignment, phylogenetic tree inference, and evolutionary hypothesis...

See Software
Galaxy

Galaxy is an open source, web-based platform for data-intensive biomedical research. If you are new to Galaxy start here or consult our help resources. You can install your own Galaxy by following the tutorial and choosing from thousands of tools from the tool shed. This instance of Galaxy is...

See Software
SnapGene

Accurately design and simulate cloning procedures. Test complicated projects, catch errors before they happen, and obtain the right constructs the first time. Cloning is easier when you can see what you are doing. The intuitive interface offers you unparalleled visibility into your work,...

See Software