A quality control analysis tool for high throughput sequencing data
Near-optimal RNA-Seq quantification
Community-curated list of software packages and data resources
RNA coding potential assessment tool
BBMap short read aligner, and other bioinformatic tools.
High-performance read alignment, quantification and mutation discovery
Molecular dynamics by NMR data analysis
A code primarily aimed at DNA and RNA coarse-grained simulations
The UEA sRNA Workbench
Comprehensive analysis of small RNA sequencing data
Feature selection and deep learning modeling for omic biomarker study
Splicing Prediction in Consensus Element
PCR primers / probes design from multiple & degenerate sequences
Fusion gene detection pipeline bundled into a Singularity container.
Short-read de novo assembler that identifies chimeric contigs.
Accurately and fast analyzing microRNAs transcriptome in plants
R code/package for virus small RNA sequence data
cellPAINT allows users to create living illustrations of biology.
Somatic fusion-genes finder for RNA-seq data
Identification of pathogenic microorganisms in diagnostic samples
A de novo local assembler for paired reads
Hybrid Lineage Transcriptome Explorer
CusVarDB generated variant protein database from NGS-datasets