CStone

> CStone wiki: https://sourceforge.net/p/cstone/wiki/Home/

Related Software:
1. CStone: (See wiki)
2. CSReadGen: https://sourceforge.net/projects/csreadgen/
3. CView: https://sourceforge.net/projects/cview/
4. ChimSim: https://sourceforge.net/projects/chimsim/
5. TVScript: https://sourceforge.net/projects/tvscript/
6. SeQuester: https://sourceforge.net/projects/sequester/
7. TreeScope: https://sourceforge.net/projects/treescope/

Features

De novo assembly of RNA-Seq data.
Identification of non-chimeric contigs.
Cross-platform compatibility.
Executable jar available.
No external packages required.
Code easy to follow and incorporated to other tools.
Information on complexity of underlying gene families.
de Bruijn like approach.

Project Samples

Project Activity

See All Activity >

Follow CStone

CStone Web Site

Other Useful Business Software

99.99% Uptime for MySQL and PostgreSQL Databases

Sub-second maintenance. 2x read/write performance. Built-in vector search for AI apps.

Cloud SQL Enterprise Plus delivers near-zero downtime with 35 days of point-in-time recovery. Supports MySQL, PostgreSQL, and SQL Server.

Try Free

Additional Project Details

Registered

2021-05-11

Similar Business Software

OmnibusX

In the world of biological data science, navigating vast and complex datasets can be a daunting task. Our software toolkit is designed to empower you by accelerating analysis, promoting accessibility, and providing comprehensive visualization tools to help you make sense of these intricate...

See Software
ruffus

Ruffus is a computation pipeline library for python. It is open-sourced, powerful and user-friendly, and widely used in science and bioinformatics. Ruffus is designed to allow scientific and other analyses to be automated with the minimum of fuss and the least effort. Suitable for the simplest...

See Software
SnapGene

Accurately design and simulate cloning procedures. Test complicated projects, catch errors before they happen, and obtain the right constructs the first time. Cloning is easier when you can see what you are doing. The intuitive interface offers you unparalleled visibility into your work,...

See Software
G6GFINDR System

g6gTech, Inc. is a software development company that creates in-depth search products in the bioinformatics and artificial intelligence (AI) fields. We have recently changed our name from the G6G Consulting Group to emphasize our focus on creating products. Powered by semantic annotation, the...

See Software
Bioconductor

The Bioconductor project aims to develop and share open source software for precise and repeatable analysis of biological data. We foster an inclusive and collaborative community of developers and data scientists. Resources to maximize the potential of Bioconductor. From basic functionalities to...

See Software
Genome Analysis Toolkit (GATK)

Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. The GATK...

See Software