TreeScope

Use dynamic trees to increase interactability with sequence data.

Brought to you by: john-archer

Downloads: 0 This Week

Last Update: 2025-10-03

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> See TreeScope wiki: https://sourceforge.net/p/treescope/wiki/Home/

Related Software:
1. CStone: https://sourceforge.net/projects/cstone/
2. CSReadGen: https://sourceforge.net/projects/csreadgen/
3. CView: https://sourceforge.net/projects/cview/
4. ChimSim: https://sourceforge.net/projects/chimsim/
5. TVScript: https://sourceforge.net/projects/tvscript/
6. SeQuester: https://sourceforge.net/projects/sequester/
7. TreeScope. (See wiki)

Features

Dynamic trees accross any subsection of alignment.
Nucleotide frequency extractions based on clusters identified with the trees.
Compare tree clusters easily accross different sections of an alignment
Identify specific polymorphism differences between clusters

Project Samples

TreeScope Prototype

Project Activity

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TreeScope Web Site

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2024-09-09

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