Open Source Python Scientific/Engineering Software - Page 37

Ducking is a software who is providing simulation of probable docking between two proteins using rigid body monte carlo method. It is written in python and uses the libraries wxPython, VTK, SciPy and BioPython.

SCons is a make replacement providing a range of enhanced features such as automated dependency generation and built in compilation cache support. SCons rule sets are Python scripts so as well as the features it provides itself SCons allows you to use the full power of Python to control compilation. This is a SCons extension (tool) which enables usage of the dvipdfm program to convert dvi files to pdf.

A Python library bringing together utilities I've written over the years for work in bioinformatics and biostatistics, which should be generally applicable outside these fields as well. Focuses on string processing, DBI, and math.

""" E-Cell's source code repository has moved to GitHub! https://github.com/ecell The development of E-Cell now continues on GitHub. The Subversion repository was abandoned. """ E-Cell System is an object-oriented software suite for modeling, simulation, and analysis of large scale complex systems such as biological cells. It allows many components driven by multiple algorithms with different timescales to coexist in a model.

Simulador de trânsito. Objetivos: - Criar um modelo de trânsito, abrangendo espaço urbano, automóveis e motoristas; - Permitir pesquisa a respeito de otimização do trânsito. Escrito em Delphi (ou não).

Maldonado E, Khan I, Philip S, Vasconcelos V, Antunes A (2013) EASER: Ensembl Easy Sequence Retriever. Evolutionary Bioinformatics, 9:487-490. doi: https://doi.org/10.4137/EBO.S11335.

ED Software project contains several programs used (mostly) for processing gas-phase electron diffraction (GED) experimental data.

The EdfExplorer Software is a plugin based architecture to transport and convert EDF files (ESRF Data File) to HDF5 (Hierarchical Data Format). It allows the exchange of an entire data acquisition folder to be manipulated by common internet free tool

The EMCD Utility Program is designed to process EELS spectra (filtering, shift/stretch on a common energy scale) in order to generate qualitative EMCD signal by substracting the spectra. See also:

This project contains tools, that were created during the work with the Katana robotic manipulator at the workgroup EOS of the University of Magdeburg.

The EP avr-gcc library is a funktion library in C for the Atmel AVR Microcontroller. It has functions for LCD, USART and more.

EUtils is a python client-side library for querying the NCBI's Entrez life science databases through the NCBI eUtils web services.

Converts RAW Thermo Files into MGF files (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/easiermgf3/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124

Easy Equations is a utility using which one can write the mathematical equations. The focus of this utility is to provide user friendly access to write mathematical equations which is helpful for students, lecturers, mathematicians and Research persons who prefer using mathematical equations in a document, PowerPoint or web sites. Works on Windows as well as Linux platforms. Software Requirements: JDK 7 or higher. Linux Platform with kernel version 2.7 or higher.(for Linux users).python necessary only in linux environment to use COPY functionality.python is pre installed in recent linux distributions.

The goal of this project is to develop a generic and powerful 3D simulation framework mainly but not exclusively targeted at game development. Important aspects are efficency and simplicity of use.

Echoproc is a piece of scientific analysis software used to extract physical ice sheet characteristics from radio echograms from experiments like the Center for the Remote sensing of ice sheets (https://www.cresis.ku.edu/)

EcoAccess is a non-profit organization. Our mission is to empower people to make informed decisions, using the Internet, that address the root causes of environmental challenges. We are building a free community web site where anyone can ask environmental

Electronics schematics, PCB images, firmware and documentation to create and deploy a network of ecology related sensors.

Image Processing software for combining information from images of the same scene, but with illumination variations or small changes. This work is the result of the coursework of an Image Processing regular course at IMPA.

EduLB is a small and easy to handle lattice Boltzmann code for channel flow. Main objective is to give interested people the opportunity to play around and see how things work. For feedback, leave a review, leave a comment on the discussion page or send me a private mail.

Educational Learning Classifier System (eLCS) is a set of learning classifier system (LCS) educational demos designed to introduce students or researchers to the basics of a modern Michigan-style LCS algorithm. This eLCS package includes 5 different implementations of a basic LCS algorithm, as part of a 6 stage set of demos that will be paired with the first introductory LCS textbook. Each eLCS implementations (from demo 2 up to demo 6) progressively add major components of the entire LCS algorithm in order to illustrate how work, how they are coded, and what impact they have on how an LCS algorithm runs. The Demo 6 version of eLCS is most similar to the UCS algorithm. Each version only includes the minimum code needed to perform the functions they were designed for. This way users can start by examining the simplest version of the code and progress forward. This code is intended to be used as an educational tool, or as algorithmic code building blocks.

Egotistics is a social network analysis program that allows users to simultaneously explore multiple personal networks (called 'ego networks').

Electronic Components Database, is a customizable database for electronic components thought for electronic hobbyist.

Set of tools for basic analysis of electrophysiological data. The Python classes show how to call OpenElectrophy functions and save data. The R library applies circular statistics to spike phase data and saves the best von Mises fit and the Rayleigh statistics on the disk. The wavelet coherence analysis is done in R by the package "sowas". Check the module R_coherence to see how we solved that problem. This packages may be useful for people who start using OpenElectrophy and circular statistics in R. If you find errors, please report them. The project is still in development, so in the future you'll get updates.