Protein Cavity Search download

Software to identify cavities and crevices in proteins. The goal is to be able to take a protein structure, and to differentiate between five different types of environments for each residue: buried, surface, interfacial, cavity, or crevice.

Features

Calculate volumes of internal cavities
Determine environment of ionizable residues
Calculate depth of burial for ionizable residues
Calculate packing density for ionizable residues

Project Activity

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License

GNU General Public License version 3.0 (GPLv3)

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Additional Project Details

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Python

Related Categories

Python Molecular Science Software, Python Bio-Informatics Software

Registered

2010-05-25

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