HyperProtein

HyperProtein

Hypercube
NAMD

NAMD

Theoretical and Computational Biophysics Group
HyperProtein NAMD

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HyperProtein:

About

HyperProtein is Hypercube, Inc.'s new product focusing on the computational science associated with protein sequences. The product includes the analysis of one-dimensional protein sequences as well as the analysis of consequent three-dimensional protein structures. In particular, the relationship between sequence and structure is a fundamental facet of the product. Unlike individual software programs that provide capability for some aspect of protein sequence or structure, such as sequence alignment, HyperProtein puts together a multitude of Bioinformatics and Molecular Modeling tools related to the science that initiates with a protein sequence.
NAMD:

About

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. Based on Charm++ parallel objects, it scales from desktop and laptop computers to high-end parallel platforms, hundreds of cores for typical simulations, and beyond 500,000 cores for the largest simulations. NAMD is built for researchers who need to simulate large molecular systems efficiently while preserving compatibility with widely used molecular modeling workflows. It uses the popular molecular graphics program VMD for simulation setup and trajectory analysis, and it is file-compatible with AMBER, CHARMM, and X-PLOR. It is designed to support biomolecular simulations involving proteins, membranes, nucleic acids, solvents, ions, and other molecular systems where atomic interactions and time-dependent motion need to be studied in detail.
HyperProtein:

Platforms Supported

Windows Not Supported
Mac Not Supported
Linux Not Supported
Cloud Supported
On-Premises Not Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported
NAMD:

Platforms Supported

Windows Supported
Mac Supported
Linux Supported
Cloud Not Supported
On-Premises Not Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported
HyperProtein:

Audience

Scientists in need of an advanced Chemical platform
NAMD:

Audience

Biophysicists, biologists, and simulation researchers requiring a biomolecular simulation tool for desktops, clusters, GPUs, and supercomputers
HyperProtein:

Support

Phone Support Not Supported
24/7 Live Support Not Supported
Online Not Supported
NAMD:

Support

Phone Support Not Supported
24/7 Live Support Not Supported
Online Supported
HyperProtein:

API

Offers API Not Supported
NAMD:

API

Offers API Not Supported
HyperProtein:

Screenshots and Videos

NAMD:

Screenshots and Videos

HyperProtein:

Pricing

No information available.
Free Version Not Supported
Free Trial Not Supported
NAMD:

Pricing

Free
Free Version Supported
Free Trial Not Supported
HyperProtein:

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software
NAMD:

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software
HyperProtein:

Training

Documentation Not Supported
Webinars Not Supported
Live Online Not Supported
In Person Not Supported
NAMD:

Training

Documentation Supported
Webinars Not Supported
Live Online Not Supported
In Person Not Supported
HyperProtein:

Company Information

Hypercube
www.hypercubeusa.com
NAMD:

Company Information

Theoretical and Computational Biophysics Group
Founded: 2006
United States
www.ks.uiuc.edu/Research//namd/
HyperProtein:

Alternatives

NAMD:

Alternatives

HyperProtein:
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ESMC

Biohub
NAMD:
HyperProtein:
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Evo 2

Arc Institute
NAMD:
HyperProtein:
NAMD:
Ascalaph Designer

Ascalaph Designer

Agile Molecule
HyperProtein:
Photo51

Photo51

Fearless League
NAMD:
HyperProtein:

Categories

Bioinformatics Supported
Chemical Supported
Molecular Modeling Supported
NAMD:

Categories

HyperProtein:

Chemical Features

Certificates of Analysis Not Supported
Chemical Process Simulation Supported
Computer-Assisted Structure Elucidation (CASE) Not Supported
Inventory Management Not Supported
ISO Management Not Supported
Particle Tracking Not Supported
Reporting & Statistics Not Supported
Samples Tracking Not Supported
Traceability Not Supported
Uncertainty Analysis Not Supported
HyperProtein:

Integrations

No info available.
NAMD:

Integrations

No info available.
HyperProtein:
Claim HyperProtein and update features and information
Claim HyperProtein and update features and information
NAMD:
Claim NAMD and update features and information
Claim NAMD and update features and information