Open Source Java Scientific/Engineering Software - Page 32

Cancer registries need a tool to input, store, check and analyse their data. If these data are also coded and verified in a standard way, it facilitates the production of comparable analyses across registry populations. The main goal of the CanReg5 project is to provide a flexible and easy to use tool to accomplish these objectives. CanReg5 is a multi user, multi platform, open source tool to input, store, check and analyse cancer registry data. It has modules to do: data entry, quality control, consistency checks and basic analysis of the data It was designed with an emphasis on user friendliness, it has a modern user interface and is easy to navigate. Is available in several languages. (English, French, Spanish, Portuguese, Russian, Turkish, Georgian, and Chinese.)

It is a Client Application developed in Java that sends simultaneous OGC CSW requests to several metadata catalogues (ebRim or ISO 19115/19119 profile), processes the responses and shows them in a single web page.

It uses two different solutions: - placing of circles closest to the center from the largest to smallest, see brianshaler on github https://github.com/brianshaler/Circle-Packing-in-Processing - simulation "real" world with use of a Java Physics Engine JBox2D, see http://www.jbox2d.org

Adaboost extensions for cost-sentive classification CSExtension 1 CSExtension 2 CSExtension 3 CSExtension 4 CSExtension 5 AdaCost Boost CostBoost Uboost CostUBoost AdaBoostM1 Implementation of all the listed algorithms of the cluster "cost-sensitive classification". They are the meta algorithms which requires base algorithms e.g. Decision Tree Moreover, Voting criteria is also required e.g. Minimum expected cost criteria Input also requires to load an arff file and a cost matrix (sample arff and cost files are uploaded for users' reference) This extension uses weka for classification and generates the classification model along with confusion matrix. For given dataset and cost matrix

A college project, done for Indian Armed Forces. Army Firing Training Simulator using Android. 4 member team led by Arun Scaria, myself, Mahesh and Ashwin were devs. Has all the drawbacks of our first OS contribution, we'll keep updating.

Etchimaths is a Mathematics software, a helping tool for Mathematics simulation(solving) and study.It is a solving as well as a teaching software. It involves Mathematics programs at various levels of studies;they include: 1.Etchimaths(O'LEVEL) 2.Etchimaths(A'LEVEL) 3.Etchimaths(UNIVERSITY) 4.Etchimaths(BEPC/BEPC+1) 5.Etchimaths(BAC) 6.Etchimaths(UNIVERSITE) 7.Etchimaths(ULTIMATE) and more to come in future..

Framework SRM (Sound Recognizer ME) written in Java Micro Edition capable of recognize abstract sounds and isolated words announcer dependent on mobile devices.

The Genomic Diversity and Phenotype Data Model (GDPDM) captures molecular and phenotypic diversity data. MySQL databases are used to implement the schema. This project develops software tools (written in Java, Perl, etc.) associated with this model.

GRad is a standalone solar radiation model, programmed in Java. It is capable of the calculation of potential (clear sky) and actual (real sky) irradiance and total irradiation for single and multiple geographical locations. Note that, while fully functional, this application is currently not developed any further.

Utility for tracking cycles of menstruation and for prediction of next period's date. Also you can use this to keep encrypted photos in nice gallery.

It is a suite to create interfaces (HMI) for production system supervisory and control (SCADA) Systems.

A cross-platform Java program to turn a simple Geiger counter into the equivalent of a state-of-the art digital model, plus some – using your laptop computer.

Ghawwas (previously known as Khawas) is an open source system for Arabic corpora processing. Ghawwas V4.0 provides the following main functions: a. Frequency list for single word and N-Grams b. Concordance c. Collocation (MI, CHI Squared, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient) d. Lexical patterns search e. Two corpora frequency profile comparison based on MI, CHI, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient f. Accept Windows and UTF-8 character encoding g. Accept TXT, DOC, DOCX, RTF and HTML formats h. Export the processing results in CSV file format

Open source Android (1.6 or greater) GPS for OpenStreetMaps. The project has been initiated by the master 2 STIC, at the University of Savoie (France). UserGuide => http://sourceforge.net/apps/mediawiki/gopens/index.php?title=UserGuide:GoPenS_En

A Java library and set of tools to quickly and easily manipulate graphs (set of nodes and edges) and dynamic graphs. The principal trait of this library is its ability to manage (create, edit, layout, display) continuously evolving graphs. The development of this project now takes place on Github. Visit the official Graphstream website at http://graphstream-project.org

Use this suite of Application Programming Interface (API) platforms to share web content across multiple channels. Mobile and tablet applications, widgets, and web pages may use the APIs to deliver and update content. The APIs allow content reuse and reduce development costs and product time-to-market. The APIs are available as .NET or Java instances. For more information, see the ReadMe.txt file in the downloadable zip archive. The Centers for Disease Control and Prevention (CDC) and the Department of Health and Human Services (HHS) Assistant Secretary for Public Affairs office (ASPA) developed these APIs in collaboration with the Food and Drug Administration’s (FDA) Center for Tobacco Products (CTP). The CDC, FDA/CTP, HHS/ASPA, and the National Institute of Health’s National Institute for Allergy and Infectious Diseases (NIH/NIAID) use these platforms. https://syndication.hhs.gov http://tools.cdc.gov http://tools.niaid.nih.gov http://tools.fda.gov

Graph visualization using hyperbolic geometry (hyperbolic trees, but also general graphs). Applications cover web site structures, topic maps, organisational charts and wikis.

IQuant is an automated pipeline for quantitative proteomics based upon isobaric tags. It integrates post-processing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags for quantification. IQuant can run from a graphical user interface (GUI) as well as a command-line interface and work with both Windows and Linux system. This website contains the IQuant software, an example data labeled by iTRAQ-8plex for testing and a user's manual. If you have any question about IQuant, please contact me: wenbo@genomics.cn. The source code of IQuant can be found here "https://sourceforge.net/p/iquant/code/".

JavaMath is oriented toward integrating existing compute engines, such as Maple, Mathematica or GAP, into Internet accessible mathematical services.

Java editor for petri nets, based on the ARP analyzer. Exports nets to GIF, JPEG, PNG, PPM, ARP and PNML (XML based) file format. Uses the excellent JHotDraw 5.2 framework.

JRete is a rule engine written in Java. Advantages over other expert system shell and artificial intelligence(AI) API - code rules in java language, data may compute accross network with multiple JRete, auto data persistence to database, event-fire direc

A complete survey administration and data collection system. A fully featured replacement for Quancept, supporting CAPI, Web, CATI, PDA and Paper survey modes. Sonar is the reference implementation of JCaiF for CAPI and Web survey interviewing. Try it!

A Java API for manipulation of GDSII stream data. It is intended to provide a useful, reusable and platform independant library for CAD/CAE application developers. This API Requires the Java Backus-Naur Test API (JBNT). You may download it from: ht

Java and ColdFusion libraries to lookup country code and language from IP address. It uses a local copy of the WHOIS database to perform fast, accurate lookups of country codes. Useful for log analysis, internationalization, geolocation, etc..

The MIG Editor is a geographical metadata editor that implements a subset of the 19115, 19119 and 19139 ISO formats. Based in the Portuguese Metadata Profile and INSPIRE requirements.