Search Results for "website developing software"
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Showing 30 open source projects for "website developing software"
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Go From AI Idea to AI App FastAccess Gemini 3 and 200+ models. Build chatbots, agents, or custom models with built-in monitoring and scaling.
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The Systems Biology Format Converter (SBFC) is a Java generic framework aiming to translate any systems biology model format into another. The SBFC Web Site providing detailed feature description and instructions for installing, using and developing new modules is: http://sbfc.sourceforge.net/ . Currently, SBFC allows the user to convert SBML models into the formats: BioPax, Matlab, Octave, XPP, DOT, and SBGN. Due to its modular design fast development and addition of new converters is highly facilitated. SBFC can be executed in two modes: 1. standalone executable downloading the package provided in this website; 2. web-service at http://www.ebi.ac.uk/biomodels/tools/converters . ...
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We are developing data standards and software tools that implement these standards to develop a systemic approach to modeling, capturing, analyzing and disseminating flow cytometry data.
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PsPM
A matlab suite for Psycho-Physiological Modelling
...It includes linear convolution models and non-linear models for SCR, and allows for modelling of other signals, too. A flexible import interface and many utilities make this software a standalone tool. IMPORTANT: As of 04.11.2019, the official code repository for PsPM has been moved to https://github.com/bachlab/PsPM . In order to check the latest releases, discussion and bug reports, please refer to our new repository. Although this website will maintained to provide further releases, there will be no active development on the SVN repository. ... -
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CvMob is an Open Source tool to automatic visual analysis of human movement. The software calculates the optical flow to generate data about trajectory, velocity and acceleration using low-quality videos. For more informations, please visit our website: http://www.cvmob.ufba.br/
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detectMITE
Detection of Miniature Inverted Repeat Transposable Elements
detectMITE - a MATLAB-based tool for detecting miniature inverted repeat transposable elements (MITEs) in genomes. [1] Who are we? Please visit website: http://bioinfolab.miamioh.edu [2] How to cite detectMITE? Ye C, Ji G, Liang C (2016) detectMITE: A novel approach to detect miniature inverted repeat transposable elements in genomes. Sci. Rep. 6, 19688. http://www.nature.com/articles/srep19688 Ye C, Ji G, Li L, Liang C (2014) detectIR: A Novel Program for Detecting Perfect... -
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Symbiota
Mobilization of Biodiversity Data
Symbiota Virtual Flora/Fauna project is an open source software project with central goals of developing online search engines and tools that will aid in the exploration & management of biodiversity data (herbarium specimens, images, checklist, etc) -
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MuffinEC
Multi-technology, INDEL aware error correction for NGS data
...We are developing the 2nd version of MuffinEC. The beta version is already available online. The changes are listed in the VERSION_HISTORY file. Please report any problem you may encounter at the email address specified in the README file. We really appreciate your help. -
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detectIR
Detection of Perfect and Imperfect Inverted Repeats
detectIR - a MATLAB-based tool for detecting perfect and imperfect inverted repeats in genomes. [1] Who are we? Please visit website: http://bioinfolab.miamioh.edu [2] How to cite detectIR? Ye C, Ji G, Li L, Liang C (2014) detectIR: A Novel Program for Detecting Perfect and Imperfect Inverted Repeats Using Complex Numbers and Vector Calculation. PLoS ONE 9(11): e113349. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0113349 [3] detectIR user manual... -
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PRIMUS
Pedigree Reconstruction and Identification of a Maximum Unrelated Set
...For example, when there are two equally sized maximum sets of unrelated individuals in a network, PRIMUS can preferentially select the set with more affected individuals. Subscribe to the PRIMUS-Users e-mail list for notifications of updates and new versions. Relevant software: http://students.washington.edu/jeanm5/Simulate_IBD_Python.ta -
Add Two Lines of Code. Get Full APM.Works out of the box for Rails, Django, Express, Phoenix, and more. Monitoring exceptions and performance in no time.
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math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net
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Pathosphere
Code supporting Pathosphere.org
Pathosphere.org is a website designed to: Provide a means for rapid pathogen detection and characterization, and establish a more collaborative model for software development and sharing. Create an analytical environment that will enable the use of collaborators' software from anywhere, but ensure the security of analytical capabilities and data. Establish a common web front end that will capture a dynamic and changing set of analytical features. ... -
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Zoorbar 3.0
Zoorbar 3.0, software to manage and digitize zoological collection
Zoorbar 3.0 is the updated version of a software application based on MS-Access, designed to manage and digitize zoological collections. Find credits and further information about Zoorbar 3.0 on its website: http://www.gbif.es/zoorbar/zoorbar.php. -
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IQuant
A pipeline for quantitative proteomics based upon isobaric tags
...It integrates post-processing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags for quantification. IQuant can run from a graphical user interface (GUI) as well as a command-line interface and work with both Windows and Linux system. This website contains the IQuant software, an example data labeled by iTRAQ-8plex for testing and a user's manual. If you have any question about IQuant, please contact me: wenbo@genomics.cn. The source code of IQuant can be found here "https://sourceforge.net/p/iquant/code/". -
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SPADE
A toolkit for developing and deploying protein structure algorithms.
The Structural Proteomics Application Development Environment is a Python tool kit for developing and deploying bioinformatics applications. Handles graphics, analysis, and modeling of protein sequence and structure. Source and Win installers available. SPADE source code can be cloned from http://www.github.com/deaconjs/SPADE. -
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Bioinformatic tools for analyzing an orfeome using translated ORFs and compares each ORF to the provided Orfeome/Proteome. Our script uses NCBI BLAST run locally and MySQL as the main engines in a new and interisting way. It is designed specifically for Poxvirus genomes, and provides the VACV-COP nomenclature and Cowpox Ortholog groups per each ORF. The BLAST stats are generated when compared to the Proteome you provide. It can be easily adapted for other genomes.
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SeqHunter2
a stand-alone bioinformatics software for querying genome sequences
SeqHunter2 is a stand-alone software with graphical user interface, running on Microsoft windows system. It is programmed with the following functions: 1) collect and manage local sequence databases; 2) run blast search by using a batch of sequences and with abundant output formats; 3) extract sequences by a set of IDs or coordinates; 4) generate sequences alignment; 5) edit sequence and translate nucleotide to proteins; 6) browse genome and search genes; 7) collect resource items and link to the website. -
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Zoorbar 2.1.1
Zoorbar 2.1.1, software to manage and digitize zoological collections.
Zoorbar 2.1.1 is the updated version of a software application based on MS-Access, designed to manage and digitize zoological collections. Find credits and further information about Zoorbar 2.1 on its website: http://www.gbif.es/zoorbar/zoorbar.php. -
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Linking Yabi with RDA
This software system enables publication of YABI workflows to the RDA.
...YABI can be used to access the NCI-SF in Bioinformatics and the tools available through the Embl Australia EBI mirror hosted at the University of Queensland. With the support of ANDS, QFAB has developed this software system to enable the publication of services and collections based of Yabi workflows and datasets. By sharing the description of their workflows, scientists facilitate the diffusion and re-use of their data. This website provides access to the workflows and datasets that have been made public. By login in, scientist can edit, manage and publish their collection descriptions to the Research Data Australia. -
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Herbar 3.7 is the updated version of a software application based on MS-Access, designed to manage and digitize botanical collections. Find credits and further information about Herbar 3.7 on its website: http://www.gbif.es/herbar/herbar.php
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SVGMap
Open source web tool to help you in the data visualisation
SVGMap is an open source web tool to help you in the visualisation of experimental data associated to some graphical representation. More at : 1. Project website http://bg.upf.edu/svgmap 2. Reference : Xavier Rafael-Palou, Michael P. Schroeder, and Nuria Lopez-Bigas SVGMap: configurable image browser for experimental data Bioinformatics 2011 : btr581v1-btr581. -
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PyMOL Plugins aims to provide many plugins for the PyMOL software. You can find further informations about PyMOL on this website: http://www.pymol.org/
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Herbar 3.5f is the updated version of a software application based on MS-Access, designed to manage and digitize botanical collections. Find credits and further information about Herbar 3.5f on its website: http://www.gbif.es/herbar/herbar.php
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The Molwind project aims at developing Open Source software to visualize relationships among molecular entities such as chemical structures on the basis of NASA WorldWind. Different levels of complexity get visible by zooming in areas of interest.
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Herbar 3.6 is the updated version of a software application based on MS-Access, designed to manage and digitize botanical collections. Find credits and further information about Herbar 3.6 on its website: http://www.gbif.es/herbar/herbar.php
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Zoorbar 2.0 is the updated version of a software application based on MS-Access, designed to manage and digitize zoological collections. Find credits and further information about Zoorbar 2.0 on its website: http://www.gbif.es/zoorbar/zoorbar.php.
