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Detection of Perfect and Imperfect Inverted Repeats

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detectIR - a MATLAB-based tool for detecting perfect and imperfect inverted repeats in genomes.

[1] Who are we?

Please visit website:

[2] How to cite detectIR?

Ye C, Ji G, Li L, Liang C (2014) detectIR: A Novel Program for Detecting Perfect and Imperfect Inverted Repeats Using Complex Numbers and Vector Calculation. PLoS ONE 9(11): e113349.

[3] detectIR user manual

Please visit the Wiki page of this website.

[4] detectIR Q&A

For Q&A, please visit the Blog page of this website.

[5] detectIR bug report

You can report a bug as a Ticket request, or start a topic session in the Discussion webpage of this website.

[6] Update history

To see the update history, go to

detectIR Web Site


  • MATLAB-based
  • Vector Calculation
  • Complex Numbers


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