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IQuant

A pipeline for quantitative proteomics based upon isobaric tags

5.0 Stars (1)
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Description

IQuant is an automated pipeline for quantitative proteomics based upon isobaric tags. It integrates post-processing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags for quantification. IQuant can run from a graphical user interface (GUI) as well as a command-line interface and work with both Windows and Linux system. This website contains the IQuant software, an example data labeled by iTRAQ-8plex for testing and a user's manual. If you have any question about IQuant, please contact me: wenbo@genomics.cn.

The source code of IQuant can be found here "https://sourceforge.net/p/iquant/code/".

IQuant Web Site

Features

  • Support iTRAQ-8plex, iTRAQ-4plex and TMT-6plex labeling data
  • Run from a graphical user interface (GUI) as well as a command-line interface
  • Work with both Windows and Linux system
  • Support identification result from Mascot or other search engines with mzIdentML format
  • Provide a GUI for viewing result interactively

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User Reviews

  • 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    IQuant is well designed for isobaric tags labeling data analysis.

    Posted 05/20/2014
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Additional Project Details

User Interface

Java Swing

Programming Language

Java, S/R

Registered

2013-08-20

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