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detectMITE

Detection of Miniature Inverted Repeat Transposable Elements

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Description

detectMITE - a MATLAB-based tool for detecting miniature inverted repeat transposable elements (MITEs) in genomes.

[1] Who are we?

Please visit website: http://bioinfolab.miamioh.edu

[2] How to cite detectMITE?

Ye C, Ji G, Liang C (2016) detectMITE: A novel approach to detect miniature inverted repeat transposable elements in genomes. Sci. Rep. 6, 19688. http://www.nature.com/articles/srep19688

Ye C, Ji G, Li L, Liang C (2014) detectIR: A Novel Program for Detecting Perfect and Imperfect Inverted Repeats Using Complex Numbers and Vector Calculation. PLoS ONE 9(11): e113349. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0113349

[3] detectMITE user manual

Please visit the Wiki page of this website.

[4] detectMITE Q&A

For Q&A, please visit the Blog page of this website.

[5] Update history

To see the update history, go to https://sourceforge.net/p/detectmite/wiki/UpdateHistory/

detectMITE Web Site

Features

  • MATLAB-based
  • Vector Calculation

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Additional Project Details

Intended Audience

Science/Research

Programming Language

MATLAB

Registered

2015-05-27

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