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Systems Biology Format Converter

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Description

The Systems Biology Format Converter (SBFC) is a Java generic framework aiming to translate any systems biology model format into another.

The SBFC Web Site providing detailed feature description and instructions for installing, using and developing new modules is: http://sbfc.sourceforge.net/ .

Currently, SBFC allows the user to convert SBML models into the formats: BioPax, Matlab, Octave, XPP, DOT, and SBGN. Due to its modular design fast development and addition of new converters is highly facilitated.

SBFC can be executed in two modes:
1. standalone executable downloading the package provided in this website;
2. web-service at http://www.ebi.ac.uk/biomodels/tools/converters .

For general discussion about SBFC, please use the forum sbfc-forum@googlegroups.com .

A mailing-list is also available for developers: sbfc-devel@googlegroups.com


Thanks for using SBFC!

The SBFC Team

Systems Biology Format Converter Web Site

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  • 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Many one to one converters exist in Systems Biology, most of them unmaintained. This project provides an infrastructure to collaborate on a series of reference ones.

    Posted 06/01/2011
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Additional Project Details

Intended Audience

Science/Research, Developers, End Users/Desktop

User Interface

Java Swing

Programming Language

Java

Registered

2010-10-07

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