Check for selection of RNA secondary structure
rMATS-Iso is a generalization of rMATS for complex splicing patterns.
miRPlant: An Integrated Tool for Identification of Plant miRNA
MiRDeep*
Computational Suite For Bioinformaticians and Biologists
CSBB - Computational Suite for Bioinformaticians and Biologists
SNP calling, annotation and gene/transcripts expression quantification
Long read to rMATS
Transcript-discovery approach for gene feature delimitation by RNA-seq
Design of specific primer combinations for bisulfite sequencing
RNA force directed layout
A toolbox for interpretation and visualization of RNA-seq GO analysis
si-Fi is a Software for RNAi (RNA interference) off-target prediction.
A CRISPR tool for user-defined protospacer adjacent motif
C++ header only library with AI and bioinformatics algorithms
Computational Suite for Bioinformaticians and Biologists
RNA-Seq based gene prediction pipeline for fungal genomes
Multi-way analysis of The Cancer Genome Atlas (TCGA) project datasets
Transcriptome assembler for RNA-seq
Accurately discover viral integration events and fusion transcripts
identification of sequence variant associated with splicing event