A quality control analysis tool for high throughput sequencing data
DeepVariant is an analysis pipeline that uses a deep neural networks
Open Source Monitoring System for performance and availability.
script for variant calling of RNA-Seq
convert genome coordinates betweeen assemblies
An intuitive and efficient tool for preprocessing Illumina FASTQ reads
Plugin for TotalCommander to list Commodore disk images
script for variant calling of Exome-Seq
A de novo local assembler for paired reads
RNASeqBrowser: A genome browser for strand specific RNAseq reads
Reanalysis of somatic APP retrotransposition
shell script to run SVDetect with baseline adjustment
hiddenDomains: a modern HMM to identify ChIP-seq enrichment
miRPlant: An Integrated Tool for Identification of Plant miRNA
MiRDeep*
a A suite designed to study mRNAs, miRNAs and circRNAs
script of SV calling in Exome-seq
ChIP-seq coverage island analysis algorithm for broad histone marks
Open webMethods utilities and tools
Pure java NGS mapping soft run on Hadoop 2.0
A tool to detect mid sized tandem duplications
Use Apache Pig to process your large sequencing datasets!
Simple script to convert all fastq files in a directory into bam files