hiddenDomains uses a Hidden Markov Model to identify enriched domains in ChIP-seq data. It accepts BAM files for input and can perform an analysis with or without control data. The output is a BED file, ready for the UCSC genome browser, that contains the domains and is color coded according to their posterior probabilities.

Project Samples

H3K27me3 covering the Hoxa cluster in mm9

Project Activity

See All Activity >

Follow hiddenDomains

hiddenDomains Web Site

Other Useful Business Software
Gemini 3 and 200+ AI Models on One Platform Icon
Gemini 3 and 200+ AI Models on One Platform

Access Google's best plus Claude, Llama, and Gemma. Fine-tune and deploy from one console.

Build, govern, and optimize agents and models with Gemini Enterprise Agent Platform.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of hiddenDomains!

Additional Project Details

Registered

2014-08-25
Report inappropriate content