ITD-Assembler

A tool to detect mid sized tandem duplications

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Last Update: 2016-09-21

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This tool uses de novo assembly to detect Tandem Duplications in next gen assembly data. it takes as an input a bam file and outputs results in a custom format.
It is linux based and has been developed primarily in haskell, and some parts in C and python.

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2014-11-22

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