Open Source Scientific/Engineering Software - Page 99
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This program provides for easy modification and viewing of SPICE circuit files. It will also read SPICE3 RAW format (as well as GnuCap) and create graphs of results through an interactive GUI. It supports waveform math, copying to clipboard, and saving.
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KMWin
Kaplan-Meier for Windows
KMWin (Kaplan-Meier for Windows) is a convenient tool for graphical presentation of results from Kaplan-Meier survival time analysis. The programme is based on the statistical software environment R and provides an easy to use graphical interface. As an introduction, see http://dx.plos.org/10.1371/journal.pone.0038960#s2. -
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Kankin Linux
Distribuição baseada no Funtoo Linux para arquitetura ARM
O Kankin Linux é uma distribuição Stage4 do Funtoo Linux compilado para para uso em hardwares opensource com arquitetura ARM, * Preparada pra compilação distribuÃda * Sistema de ebuilds Portage, contendo todas as possibilidades de um sistema PORTS based, que só um sistema (Fu|Ge)ntoo faz por vc. :)))))))) * Primeira distribuição Linux Brasileira com releases para hardware opensource com processadores ARM * Suporte a redes DTN (Delay-Tolerant Networking) * Ferramentas da distribuição de software "Interplanetary Overlay Network" (ION-DNT - NASA) * Servidor X com suporte nativo a LXDE Manual de instalação para Raspberry Pi: http://a31.com.br/kankin-raspberrypi Manual de instalação para Cubieboard A20: http://a31.com.br/kankin-cubieboard-a20 VÃdeo: http://youtu.be/CJ-P8O4 - Apoio da Fundação Raspberry Pi: http://a31.com.br/apoio-raspberrypi - Apoio do Funtoo Linux: http://a31.com.br/apoio-funtoo -
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Kanon
A tool for examining renormalizable field theories (physics).
A tool for physics/field theory. Allows to a assemble an action integral interactively by drag and drop. Checks whether the action integral is scale invariant. Allows to determine additional marginal interactions. Contains data of dozens of renormalizable field theories. -
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D. R. Kaprekar found an interesting behaviour of four-digit number (say, 6349). Take any number; sort its digits in ascending (3469) and descinding (9643) order; subtract these (9643 - 3469 = 6174). Repeat these steps a couple of times. Surprisingly, you'
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KherveSheet
Excel for scientists: high-quality plots, Python in cells, AI side bar
KherveSheet is a desktop spreadsheet application for scientists, built in Python and running on Windows. Plotting Charts are generated using matplotlib and embedded directly in the sheet as movable, resizable objects. You have full control over axes, scales, ticks, titles and grids. Curve fitting and peak fitting are supported, with goodness-of-fit reporting overlaid on the plot. Every cell can also run a full Python program, not just a formula. An integrated AI assistant can generate the cell code from a plain-language description if needed. Learn by doing with 300 ready-made scientific examples covering plotting, data analysis, fitting and simulation. Built entirely in Python, KherveSheet adds a familiar Excel-style grid, an optimisation solver, and a native .ksheet format with CSV and Excel import/export. Runs on Windows. -
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Kinannote
Protein Kinase Identification and Classification
Kinannote identifies and classifies protein kinases in a user-provided fasta file using an HMM derived from serine/threonine protein kinases, a position specific scoring matrix derived from the HMM, and comparison with a local version of the curated kinase database from kinase.com. If the user inputs a complete proteome, additional modules evaluate the completeness of the kinome and place it in context with reference kinomes. Kinannote runs on a unix command line and depends on local hmmer 2 and Blast 2.24 installations. Citing Kinannote: Kinannote, a computer program to identify and classify members of the eukaryotic protein kinase superfamily Jonathan M. Goldberg; Allison Griggs; Janet L. Smith; Brian Haas; Jennifer Wortman; Qiandong Zeng Bioinformatics 2013; doi: 10.1093/bioinformatics/btt419 http: http://bioinformatics.oxfordjournals.org/content/29/19/2387.full pdf: http://bioinformatics.oxfordjournals.org/content/29/19/2387.full.pdf+html -
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Limpopo is a library for MAGE-TAB parsing and validation that will read mage-tab files into an object model, and includes a plugin mechanism that is open and extensible for writing MAGE-TAB data to other data resources such as a database.
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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LINE Solver
Queueing Theory Algorithms
LINE is an open-source software package to analyze queueing models via analytical methods and simulation. The solver is available for Python, MATLAB and Java. LINE features algorithms for the solution of open queueing systems (e.g., M/M/1, M/M/k, M/G/1, ...), open and closed queueing networks, and layered queueing networks. Additional details are available on the project website: http://line-solver.sf.net. -
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LM555 Timer Calculator
A Graphical Tool To Calculate Timer Components
Many of us use LM555 timer chips to generate clocks, tones for model trains, and all sort of other uses. Calculating the values of the resistors and capacitor in the timing chain, along with the duty cycle for astable operation is a bit tedious on a calculator so I built this small forms based tool to make it easier. It even has the graphic of the chip and the pin numbers to make it easy to hook things up. -
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LTI-Lib is an object oriented computer vision library written in C++ for Windows/MS-VC++ and Linux/gcc. It provides lots of functionality to solve mathematical problems, many image processing algorithms, some classification tools and much more...
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A high-performance simulation package for sampling the chemical and reaction-diffusion master equations. Primarily intended for running stochastic simulations of microbial cells.
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Matlab software for analysis of skin conductance data (SC; viz., electrodermal activity, EDA; galvanic skin response, GSR). Data decomposition and scientific analysis based on deconvolution approach. Various functions via GUI or batch-mode.
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Leibnitz
Electronic paper for computations and graphs
Leibnitz is the calculator you've always wanted (even if you didn't know it!), short of handwriting recognition. FAQ: https://github.com/jafl/leibnitz/blob/main/README.md ChangeLog: http://leibnitz.sourceforge.net/ChangeLog.html -
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LibrePLM
LibrePLM integrates CAD editors in Odoo / LibrERP
Save and manage Engineering informations from CAD system directly in Odoo or LibrERP. Integrated in CAD system, allows complete Product Lifecycle control. Reduce time to market, improve your business and avoid trivial errors. Server New Release : 2025 Q3 - Release on Odoo version 19.0. Client New Release : 2026 Q1 - Added Draftsight integration. Supported: Windows 11. Added new tool GetNodeID to help you asking activation code. Have more info : https://sourceforge.net/p/libreplm/wiki/Home Odoo is a product of Odoo SA world class leader in Open Source ERP system. Visit: http://www.odoo.com LibreERP and LibrePLM are products of Codebeex srl. Visit: http://www.codebeex.com Download Free Trial Client. Need support, customizations, more? Ask to: info@codebeex.com -
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Provides access to Belkin Nostromo n50/n52 speedpads as more than simple USB keyboard devices via configuration GUI. Also includes a basic userland linux event interface and both OpenGL and OpenAL modules for video and audio.
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A userspace USB peripheral driver for the Owon range of digital storage oscilloscopes. Based on the libUSB library it is aimed at Linux but also portable across platforms.
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MCE - Marching Cube ELD
Crystallographic software for displaying voxel maps - electron density
MCE is an crystallographic experimental program for 3D and 2D electron density map visualization. The software is mainly focused on visualization of ELD calculated from X-ray diffraction data of small molecules, but it will work for small proteins as well. Download the installation file (default download) or find in "Files" the zip-file with instant copy of the program which does not require the installation. -
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MCTDHTools
A library to easily analyse output of the Heidelberg MCTDH code
This project aims to provide a set of routines to easily read in and manipulate the output of the Heidelberg MCTDH code. The goal is to enable a new user to quickly get started with writing custom analysis programs. Also, it should enable more experienced users (== us) to write small, clean, and testable analysis programs, something that seems incompatible with the Fortran-77 code of the Heidelberg MCTDH package. -
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MS Data Miner
MS Data Miner - A web-based proteomics software
Data processing and analysis in proteomic studies is a significant challenge and very time consuming. MS Data Miner (MDM) is a freely available web-based software to analyze, process, validate, compare, and display output files from MS software, including Mascot (Matrix Science), Mascot Distiller (Matrix Science) and ProteinPilot (AB Sciex). It was developed to significantly decrease the data analysis time and to handle large proteomic studies. This open sourced system includes a spectra validation-system and automatically screenshot generation tool for Mascot-assigned spectra. In addition, a GO term analysis function and a tool for generating comparative data-reports are included. The software is described in the following paper: Dyrlund TF, Poulsen ET, Scavenius C, Sanggaard KW, Enghild JJ. MS Data Miner: A web-based software tool to analyze, compare and share mass spectrometry protein identifications. PROTEOMICS 2012 http://www.ncbi.nlm.nih.gov/pubmed/22833312 -
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Magnum Opticus
Optical Design Software
Optical design application geared to telescopes and other optical systems. Features include layout design, optimization, standard expected output, ability to import ZMX and LNS files -
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Maple Tree is a Java based visualization tool used by researchers in the biological sciences to visualize and graphically browse the results of analyses of gene expression data collected from microarray experiments.