Open Source Scientific/Engineering Software - Page 92

energy logger excel converter Converter for files of current measurement device Voltcraft Energy Logger. A excel sheet converts the .bin files into an excel spreadsheet. Energylogger 3500/4500 bin files supported(Conrad articel nbr 125323).

EziDebug is an easy-to-use versatile logic simulation tool for verification and debugging of digital circuits. It supports inserting scan chains in projects. Furthermore，more functions and characteristics will be opened. This manual is intended for users with no previous experience with EziDebug . It introduces you with the basic flow how to set up EziDebug. The example used in this tutorial is a small design written in Verilog and only the most basic commands will be covered in this manual. This manual was made by using Version 1.0 of EziDebug on Windows.

One goal of sequencing based metagenomic analysis is the quantitative taxonomic assessment of microbial community compositions. However, the majority of approaches either quantify at low resolution (e.g. at phylum level) or have severe problems discerning highly similar species. Yet, accurate quantification on species level is desirable in applications such as metagenomic diagnostics or community comparison. GASiC is a method to correct read alignment results for the ambiguities imposed by similarities of genomes. It has superior performance over existing methods. You can find the accompanying paper here: http://nar.oxfordjournals.org/content/41/1/e10.short Thanks to the great work of the SeqAn team, you can now use GASiC as a Knime workflow: https://github.com/seqan/knime_seqan_workflows/tree/master/metagenomics_gasic_workflow

Please download Windows and Linux version by clicking on "Browse All Files". GPUmat allows standard MATLAB code to run on GPUs. The engine is written in C/C++ and based on NVIDIA CUDA. Please contact gpyougroup@gmail.com for any questions. Unfortunately GPUmat was compiled for CUDA 5.0 and we basically stopped any support for other CUDA version because we don't have the resources to do it. But you can compile the source code if you want. Instructions to compile the source code: You need to download a SVN client and then from command line: svn export http://svn.code.sf.net/p/gpumat/code/trunk ./GPUmat the above command creates a folder ./GPUmat with the source code. Then go to the 'doc' folder, open the GPUmat_Developer_Guide.pdf and check the chapter "Source code compilation"

GeoWE is an open free GIS platform oriented to advanced geodata editing on The Web. The main aim of this initiative is to move the strenghts usually linked to desktop GIS to a web environment, by leveraging open source technologies. This is a free software project that is part of the open source GIS world, and it is developed in Java using the Google Web Toolkit framework. The geowe-core is being developed using the following technologies: - GWT (Google Web Toolkit) - JBoss ERRAI Framework - Sencha GXT - GWT-OpenLayers

GPS GPX Merge Program. Merge Routes for GPX exchange

Graidle is a project that is proposed to create a web application to generate graph diagrams. There are several classes specialized in generating histograms(horizontal),line(filled) pie and spider charts.

Java ILP is a simple java interface to (mixed) integer linear programming solvers such as lp_solve, Glpk, Gurobi, SAT4J (0-1 ILP), MiniSat+(0-1 ILP), CPLEX, or Mosek. (documentation at http://javailp.sourceforge.net/)

This application lets STM or AFM images AND molecular models to be overlaid. It is useful to understand how your molecules fit to what you observed and can help interpret your data. What makes this application more useful than paint programs (powerpoint or inkscape) is the fact that the size of the images and of the molecule is fixed, so that you know that you are working in real space. Check https://sourceforge.net/p/spm-and-mol-viewer/wiki/Home/ for updates.

MATSim is a framework for building multi-agent transport simulations. MATSim has moved to GitHub: https://github.com/matsim-org/matsim Source code and newer releases are now hosted at GitHub!

MITSIM is a simulation-based laboratory developed for evaluating the impacts of alternative traffic management system designs at the operational level. It was developed at the MIT Intelligent Transportation Systems (ITS) Program.

This software is a very simple network analyzer. When you click the start button, it will send a configurable stream of UDP packets to a host. (The receiving host is then required to echo all the packets back to the sender, which can be easily done via iptables rule under linux). Once the eched packets arrives back to the sender, the analyzer will calculate all the related statistics like, packet loss, jitter throughput etc... NOTE: in order to receive the echo packets you must configure the receiving host to echo the incoming packets. In the next release i will provide another java application that just echo on an UDP port.

OpenTCP is a highly robust and portable implementation of the TCP/IP and Internet application-layer protocols intended for those who want to implement TCP/IP functionality in truly resource constrained environments (8/16-bit MCUs).

PAGC is a command line and web service C library for performing postal address geocoding. A postal address geocoder takes a sufficiently detailed postal addresses and produces a digital map that displays the spatial location of those addresses.

ParaDB is a web-based (PHP/MySQL) application designed for use by ghost hunters and paranormal researchers. The software consists of a web-based interface for case management, client relations and investigative reporting.

Parallel Colt is a multithreaded version of Colt - a library for high performance scientific computing in Java. It contains efficient algorithms for data analysis, linear algebra, multi-dimensional arrays, Fourier transforms, statistics and histogramming

A collection of applets used to demonstrate physics and math principles. The applets include: a ray diagram drawing applet, a collision of disks applet, an electromagnetic field mapper and a 3d hydrogen orbital simulation.

An easy to install and use toolbox for octave for the calculation purpose of power system along with features like Economic load dispatch, load flow analysis, transmission line parameter and swing equation etc

This will be a place to release tools that have not yet been added to SciPy (or will not be added for whatever reason). Currently an interface to ImageMagick is here.

A module containing python wrappers for the SUite of Non-linear DIfferential/ALgebraic Solvers (SUNDIALS), using ctypes.

The Robotics Library (RL) is a self-contained C++ library for rigid body kinematics and dynamics, motion planning, and control. It covers spatial vector algebra, multibody systems, hardware abstraction, path planning, collision detection, and visualization.

SCaVis is an environment for scientific computation, data analysis and data visualization for scientists, engineers and students. The program is fully multiplatform (100% Java) and integrated with Java and a number of scripting languages: Jython (Python), Groovy, JRuby, BeanShell. SCaVis can be used to plot functions and data in 2D and 3D, perform statistical tests, data mining, numeric computations, function minimization, linear algebra, solving systems of linear and differential equations. Linear, non-linear and symbolic regression are also available. Elements of symbolic computations using Octave/Matlab scripting are supported. The project was migrated to DataMelt.

SITools2 is a new CNES generic tool performed by a joint effort between CNES and scientific laboratories. The aim of SITools is to provide a self-manageable data access layer deployed on already existing scientific laboratory databases.

- Save and open a Work/Project (spf) file - Single fitting/ Batch fitting (user defined custom func) - Matrix to XYZ in Tool menu - Symbol plot: makers, curve, landscape, bar, etc. - Implemented a 3d surface plot (GLSurface) based on OpenGL (ScienPlot v1.3.2 and above) - ColorMap surface, trisurface, Pie, Polar plots, and 3D height field, 3dBar, scatter plots (under developing), and more - Column by column plotting/calculation - LaTex commands enclosed by $ symbols can be used for the labels in Graph - Accept txt(Text) and csv(Comma separated values) formatted data - Save, copy, print Graph - Use spread sheets to display data - Textboard to organize the results - Graphs in a publishable quality - Source codes based on: Python Numpy Scipy Matplotlib WxPython Visvis etc. - Special functions - Drag and drop data files - Python console is back (since v1.3.3), capable of reusing column data - Debye and Guinier models for SANS / SAX data - More apps in our Web below

SigPack is a C++ signal processing library using the Armadillo library as a base. The API will be familiar for those who has used IT++ and Octave/Matlab.