Open Source Python Scientific/Engineering Software - Page 46

A collection of bioinformatics-related software created by members of Cancer Research UK (possibly among others).

Python library for Wageningen B-Series Propeller calculations

Wizard-like software to run experimental procedures (at large). Each step of the procedure is a file (document, on-line form, checklist, video, program... ). Experimental data and documents are backuped together. NEW: templates of procedures

Standalone application that uses the clipboard to insert a tag in any document and/or in a log file. Tags contain context information (e.g., date, author) + text note, picture or webcam shot. Tags can contain variables generated by user and/or external programs.

The Basil project's mission is to build a parsing and modeling environment where one is able to work with, code in, integrate, and design a wide variety of computer languages.

Bender is a project intented to cover a complete UAVs system. The projects consists in three parts: the UAV Embedded software (Bender), the Control station software (Fry) and the communication protocol between UAVs and Control Station

Benetech Human Rights Program Utility Library: Collection of utilities used by the Benetech Human Rights programming for processing human rights data in preparation for statistical analysis. Library handles DSV files, name canonicalization, binarray, et

An Open Source IEC 61131-3 Integrated Development Environment, providing PLCOpen SoftPLC programming, CanOpen IO's, and SVG based HMI.

BiBler is a software for managing references to scientific articles using BibTeX. BiBler runs with a windows GUI or can be used as a Python library

Modern Open Source LIMS (Laboratory Information Management System) · Professionally supported by experts The Bika code was migrated to https://github.com/bikalims Getting Started: https://github.com/bikalims/bika.lims/blob/main/README.md Modern Bika releases are built on the Senaite LIMS core, the LIMS that originated as a Bika fork. It is therefore as new and modern as Senaite, frequently upgraded and has many very useful add-ons. Bika expands on Senaite's lean design by adding modules for bulk sample importing, two tier Sample Point Locations, instrument result importers extra COA templates etc. while remaining within ISO 17025 guidelines Other differentiation is per lab discipline, e.g. branches for environmental management, health care, geochemistry snd cannabis. User Manual: www.bikalims.org/new-manual Videos: www.bikalims.org/resources/bika-lims-videos Screenshots: www.bikalims.org/resources/screenshots Supported by Bika Lab Systems, www.bikalabs.com

A tool for estimating CdA and Crr from Garmin .tcx files.

This software screens a given peak list against web based NMR databases (nmrshiftdb, HMDB...) and return possible molecules. It also take a given molecule to return expected peaks list.

Biologic Institute's Stylus simulation software suite. (See the SVN repository for source code.)

Biological Annotation Tool is a general-purpose high speed environment for manipulating biological sequence annotations in multiple input and output formats. A plugin-style API permits much extensibility.

A collection of corpus and access routines for developing biological literature analysis systems.

Bitmap Gauger is a multipurpose tool for determining coordinates, distances, areas, radii and angles in bitmaps. User defined scaling and coordinate transformations are provided.

This is a Python script for Blender which uses short (quaternion-based, floretion-based) algorithms to draw curves in space. The user can create new shapes and curves by setting a variety of parameters.

Using Blender3D as an interface for NC Simulation and Visualization

Blitzer is a simple tool for driving the SX-Blitz microcontroller programmer from Parallax. There is now a version for PalmOS devices.

FreeBlockSim is a graphical block diagram editor/simulator for use with FreeSim++. FreeSim++ is a free to use C++ block library for dinamical systems simulation. Available soon on www.estudios-electricos.com

Compares botnet detection methods by computing the error metrics by reading the labels on a NetFlow file. The original NetFlow should have a new column for the ground-truth label, and a new column with the prediction label for each botnet detection method. This program computes all the error metrics (TPR, TNR, FPR, FNR, Precision, Accuracy, ErrorRate, FMeasure1, FMeasure2, FMeasure0.5) and output the comparison results. It also ouputs a png plot. The program can compare in a flow-by-flow basis, or it can apply our new botnet detection error metrics, that is time-based, detects IP addresses instead of flows and it is weighted to favor sooner detections. See the paper for more details.

BoulderALE is an RNA alignment editor, which allows for the annotation of basepairs, annotation and collapsing of features (horizontal) and sequences (vertical), along with 2D display of sequences and base composition given a secondary structure.

Volumetric file viewer for the human brain. Easy, powerful and flexible fMRI/MRI brain research and clinical neuro-surgery tool. Using state of the art open VTK 3D library, the proven Qt GUI toolkit, coded in Python.

Brainlab is a Python toolkit to aid in the design, simulation, and analysis of spiking neural networks with the NeoCortical Simulator (NCS).