Open Source Python Scientific/Engineering Software - Page 50

Magnolya enables copy number variation (CNV) detections without using a reference genome. Magnolya directly compares two next-generation sequencing datasets.

Malware Analysis Network in Taiwan <Man in Taiwan, MiT> Welcome to contact us (TonTon@TWMAN.ORG) if you are interested in collaborating with us. This project is open source and distributed under the GNU General Public License version 3. Please feel free to add to or modify this source and propose changes or new converters. Developer & Copyrighted by : TonTon Hsien-De Huang Prompter: Jazz Yao-Tsung Wang, Figaro Chen-Ho Yang | Logo Desinger:Temaki Guo Community on Google+：http://X.TWMAN.ORG/Community/ SourceForge: https://sourceforge.net/projects/twmanplus/files/ FaceBook: https://www.facebook.com/TWMAN.PLUS

Manim is a Python library and animation engine designed for creating precise, programmatic mathematical visuals—famously used by 3Blue1Brown. It enables developers and educators to script animations using code and produce high-quality explanatory math videos.

MantelTester is a GUI to easily perform mutual Mantel Tests on any number of input matrices, process the results and put all that together in a standard report.

This project has born to set a place where you can find simple scripts in python to be used for mapping activities.

Educative desktop application that it's main goal is develop any kind of mathematical operation in an easy and quick way. It's focus to users that don't have programming knowledge.

A set of python programs for forward modelling of marine notch formation, along with an pseduo-inverse model for obtaining relative sea level curves from notch data.

A script to generate random text using Markov chains. Output text will be stylistically similar to the training text.

The package enables detection of sequence variation between metagenomic samples.

The Massive G Engine is a simple yet feature-rich extensible 3D simulation engine for Robotics Research and gaming.

This project contains applications which allow the user the draw the common geometry graphics (both 2D and 3D) which is available from the library.

MathCode is a terminal-based AI coding assistant focused on mathematical formalization and theorem proving. It is designed to transform plain-language mathematical reasoning into verified Lean 4 code and formal proofs. The project combines AI agents with Lean Language Server Protocol integration, allowing it to inspect compiler feedback, search for lemmas, and iteratively repair failed proof attempts. It supports an agentic proving workflow where the system behaves more like an interactive mathematical engineer than a one-shot text generator. MathCode also includes visualization-oriented tooling such as theorem graph generation for Obsidian knowledge workflows. Its main value is bridging natural-language mathematics with formal verification systems in a way that is more automated, inspectable, and iterative than traditional theorem-proving pipelines.

DOM library for Content MathML written in Python - based on PyXML or lxml

Math tools in Python to tackle down problems in Operational Research fields. Comes with a Django based web interface to allow remote access to complex simulation means.

This project will provide translation of mathematical content, from TeX to MathML and vice-versa, and to graphics formats, as a web service. TeX, running as a daemon, is used for mathematical typography.

Mathemapy is a feature-rich calculator made in Python. It can do multiple types of division, solve equations, expand equations and more.

A library for number theory, symbolic algebra, geometry, special functions, etc, written entirely in Python.

An application that allows you to solve mathematical examples

Python scripts to convert Matlab code to Octave and back.

MatPy is a Python package for numerical linear algebra and plotting with a MatLab-like interface. It currently consists of wrappers around Numeric and Gnuplot packages, but eventually may be implemented directly in C/C++, or as interface to Octave.

Maui Scheduler is an advanced reservation HPC parallel batch scheduler for use with Linux and BSD clusters. Maui provides a complete scientific scheduling solution, supporting running custom parallel and MPI jobs over Myrinet and ethernet.

Maximal Clique Motif Reduction (MCMR) is a software program for running and then combining the output of multiple motif finder programs, such as MEME, AlignACE and Weeder, into a set of consensus predictions with associated confidence rankings.

Maximum Common Genome Alignment (MCGA) Tool MCGA is a bioinformatics analysis tool written in Python for generating core genome alignment for bacterial whole genome sequences which can be used to construct phylogenetic trees.

This project is the software development section for the McGill underwater robotics team. We compete here: http://www.auvsi.org/about/

MePrId is a Python program which can be used to classify a protein, depending whether it is a membrane or a globular protein. Download link: http://meprid.svn.sourceforge.net/viewvc/meprid.tar.gz?view=tar