Showing 159 open source projects for "model-builder"

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  • 1
    SMILI

    SMILI

    Scientific Visualisation Made Easy

    The Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', is an open-source, light-weight and easy-to-use medical imaging viewer and library for all major operating systems. The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with...
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    Downloads: 65 This Week
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  • 2

    PROPER Optical Propagation Library

    Routines for wavefront propagation in IDL, Matlab, and Python

    ...It is currently available for IDL (Interactive Data Language), Matlab and Python (3.x). It includes routines for generating complex apertures and obscurations and aberrations (Zernike & PSD-defined). It includes a model of a deformable mirror for wavefront control. The routines perform near and far field propagation with automatic selection of propagators. The latest version is v3.3.5.
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    Downloads: 61 This Week
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  • 3
    GenX

    GenX

    X-Ray and Neutron Reflectivity Modeling

    GenX is a scientific program to refine x-ray refelcetivity, neutron reflectivity and surface x-ray diffraction data using the differential evolution algorithm. GenX is very modular and highly extensible and can be used as a general fitting program.
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    Downloads: 67 This Week
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  • 4

    Chemical Trajectory Analyzer

    A software package for processing and analyzing chemical trajectories

    ...Theory Comput. 13 (2017), 3955-3960 M.Döntgen, F.Schmalz, W.A.Kopp, L.C.Kröger, K.Leonhard, "Automated Chemical Kinetic Modeling via Hybrid Reactive Molecular Dynamics and Quantum Chemistry Simulations", J. Chem. Inf. Model. 58 (2018), 1343-1355 Check the Wiki for bug reports and fixes.
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    Downloads: 4 This Week
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  • 5
    NAVAL-SEM

    NAVAL-SEM

    Free offline SEM software with HTMT, bootstrapping & exports

    ...Designed for researchers, PhD scholars, professors, students, and analysts, it enables advanced quantitative research without subscriptions, cloud dependencies, or proprietary software restrictions. Key features include visual drag-and-drop model building, bootstrapping, mediation analysis, HTMT, AVE, Composite Reliability (CR), Cronbach's Alpha, model fit assessment, and Multi-Group Analysis (MGA). NAVAL-SEM also supports export to R, Python, and Lavaan for reproducible research workflows. Built for academic and professional research, NAVAL-SEM helps users conduct scale validation, measurement assessment, and structural modeling across disciplines including marketing, management, psychology, education, healthcare, and social sciences. ...
    Downloads: 25 This Week
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  • 6
    DAE Tools Project

    DAE Tools Project

    Object-oriented equation-based modelling and optimisation software

    ...It is not a modelling language nor a collection of numerical libraries but rather a higher level structure – an architectural design of interdependent software components providing an API for: - Model development/specification - Activities on developed models, such as simulation, optimisation, sensitivity analysis and parameter estimation - Processing of the results, such as plotting and exporting to various file formats - Report generation - Code generation, co-simulation and model exchange The following class of problems can be solved by DAE Tools: - Initial value problems of implicit form - Index-1 DAE systems - With lumped or distributed parameters - Steady-state or dynamic - Continuous with some elements of event-driven systems
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    Downloads: 12 This Week
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  • 7
    Hyperfit

    Hyperfit

    Software for calibration of hyperelastic constitutive models

    This software allows to fit various hyperelastic constitutive models. Optimal set of parameters of a selected constitutive model can be identified. Many advanced setting, methods and corrections are available to get optimal results according to the user's preference.
    Downloads: 0 This Week
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  • 8
    OdooPLM

    OdooPLM

    A Full PLM system based on odoo

    OdooPLM is a full open source PLM system built on Odoo. Manage 3D models, 2D drawings, BOMs, revisions and documents directly inside Odoo, with a Windows connector for the most common CAD systems. This SourceForge project hosts the WINDOWS CAD CONNECTOR. One connector works with all supported Odoo versions (v11 and later) — no need to match it to your server. Download it from the https://sourceforge.net/projects/openerpplm/files/Client/Stable/ The Odoo server modules are NOT...
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    Downloads: 21 This Week
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  • 9
    MCPower

    MCPower

    MCPower — simple Monte Carlo power analysis for complex models

    MCPower-GUI is a desktop application that provides a graphical interface for the MCPower Monte Carlo power analysis library. It guides users through the full workflow across three tabs: Model setup (formula input with live parsing, CSV data upload with auto-detected variable types, effect size sliders, and correlation editing), Analysis configuration (find power for a given sample size or find the minimum sample size for a target power, with multiple testing correction and scenario analysis), and Results (interactive charts, exportable tables, and auto-generated Python replication scripts). ...
    Downloads: 4 This Week
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  • 10

    sequoia-dap

    SEQUOIA ocean data assimilation platform (a SIROCCO suite tool)

    ***** THIS PROJECT HAS MOVED TO https://gitlab.in2p3.fr/sirocco/sdap/sdap-dev ***** ***** THIS PROJECT HAS MOVED TO https://gitlab.in2p3.fr/sirocco/sdap/sdap-dev ***** ***** THIS PROJECT HAS MOVED TO https://gitlab.in2p3.fr/sirocco/sdap/sdap-dev ***** Within the SIROCCO suite of numerical tools, the purpose of SDAP is to provide a flexible platform to carry out multivariate assimilation of geophysical data in a numerical model. The program is multi-grid (finite differences or finite elements), multi-algebra (plug-in analysis kernels), multi-model (simple standardized interface). The program supports reduced-order data assimilation methods, as well as Ensemble assimilation approaches such as the Ensemble Kalman Filter. Recent additions include extensions towards simultaneous assimilation and downscaling (AMICO project), and a toolbox for ensemble assessment (SCRUM project).
    Downloads: 0 This Week
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  • 11
    Autoplot

    Autoplot

    Autoplot is an interactive browser for data on the web

    Autoplot is an interactive browser for data on the web. Give Autoplot a URL or local file name and it creates a sensible plot of the data. Autoplot allows you to interactively browse data stored in ascii, .cdf, netcdf, and many other formats. Autoplot's source has been moved to GitHub. Thanks to SourceForge for many years of hosting!
    Downloads: 0 This Week
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  • 12
    Tellurium

    Tellurium

    Model, simulate, and analyze biochemical systems using one tool.

    Tellurium (te.) is a Python environment supporting Spyder2 IDE and Jupyter Notebook aimed for large-scale systems and synthetic biology simulation. It combines a number of existing libraries, including libSBML, libRoadRunner (including libStruct), libAntimony, and is extensible via tePlugins. In addition other tools kits such as matplotlib and NumPy are used to provide additional analysis and plotting support.
    Downloads: 0 This Week
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  • 13
    FEATool Multiphysics - FEA & CFD Toolbox

    FEATool Multiphysics - FEA & CFD Toolbox

    FEATool Multiphysics is an easy-to-use FEA and CFD Simulation Toolbox

    ...Moreover, native itegration with MATLAB and Python allows advanced simulation scripts and programmatic use cases such as in AI and machine learning [2]. [1]: https://www.featool.com/Easy-to-Use-OpenFOAM-GUI/ [2]: https://featool.com/model-showcase/2024-11-12-CFD-and-Flow-Prediction-Based-on-Deep-Learning
    Downloads: 7 This Week
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  • 14
    Baya - SoC Integration Platform

    Baya - SoC Integration Platform

    Best in class SoC Integration Platform, IP-XACT, Verilog VHDL, UPF

    ...Hierarchy Manipulation to create Power Domain, Voltage Domain, comply with Floor planning 8.a. Insert new hierarchy 8.b. Remove existing hierarchy 9. Associate the IP-XACT memory maps with the SoC component instances 10. Dump out the C Model for the entire design 11. Glue-Logic insertion 12. Spare port insertion across hierarchies 13. Automatic creation of the top module and it's ports based upon specified rule 14. Creates stub module
    Downloads: 2 This Week
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  • 15
    LabRPS

    LabRPS

    Random phenomena generator

    This is an official mirror of LabRPS. Code and release files are primarily hosted on https://github.com/LabRPS/LabRPS and mirrored here LabRPS aims to be a tool for the numerical simulation of random phenomena such as stochastic wind velocity, seismic ground motion, sea surface ... etc. It can be in a wide range of uses around engineering, such as random vibration or vibration fatigue in mechanical engineering, buffeting analysis in bridge engineering.... LabRPS is mainly to assist...
    Downloads: 2 This Week
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  • 16
    TorchQuantum

    TorchQuantum

    A PyTorch-based framework for Quantum Classical Simulation

    ...Researchers on quantum algorithm design, parameterized quantum circuit training, quantum optimal control, quantum machine learning, and quantum neural networks. Dynamic computation graph, automatic gradient computation, fast GPU support, batch model terrorized processing.
    Downloads: 2 This Week
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  • 17
    CAMPARI

    CAMPARI

    Software for molecular simulations and trajectory analysis

    ...We have added a number of new features, most notably a Python interface for interpreting user-supplied code (with the help of ForPy), a novel trajectory storage standard (with the help of libpqxx/PostgreSQL), and a module for performing transition path theory. Naturally, CAMPARI continues to provide the reference implementation of the ABSINTH force field paradigm and implicit solvation model. CAMPARI is a joint package for performing and analyzing molecular simulations, in particular of systems of biological relevance. It focuses on a wide availability of algorithms for (advanced) sampling and is capable of combining Monte Carlo and molecular dynamics in seamless fashion. CAMPARI offers the user a very high level of control over all implemented features. ...
    Downloads: 0 This Week
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  • 18
    TheoDORE

    TheoDORE

    Theoretical Density, Orbital Relaxation and Exciton analysis

    The TheoDORE (Theoretical Density, Orbital Relaxation and Exciton analysis) package is a general purpose program suite for the analysis of excited states obtained from quantum chemical excited state calculations. Wavefunction analysis is based on state and transition density matrices, which provides a unified formalism applicable independent of the wavefunction model. TheoDORE is interfaced to a number of quantum chemical programs (Q-Chem, Columbus, Turbomole, ...) and can be used for a wide range of excited state methods (MR-CI, ADC, CC, TDDFT). It is written in a modular fashion to allow for an easy extension of these capabilities. Code development moved to github: https://github.com/felixplasser/theodore-qc
    Downloads: 5 This Week
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  • 19
    MiModD

    MiModD

    Mutation Identification in Model Organism Genomes using Desktop PCs

    MiModD is a software package for genomic variant identification from next-generation sequencing (NGS) data with optimized usage of system resources and a user-friendly interface. For most model organism genomes it lets the user carry out a complete analysis from unaligned genomic NGS read data to an annotated list of variants on a regular Desktop PC within a few hours. Its user-interface is beginner-friendly and designed to encourage geneticists to analyze NGS data themselves without the help of a trained bioinformatician.
    Downloads: 7 This Week
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  • 20
    MuJoCo-py

    MuJoCo-py

    mujoco-py allows using MuJoCo from Python 3

    mujoco-py is a Python wrapper for MuJoCo, a high-performance physics engine widely used in robotics, reinforcement learning, and AI research. It allows developers and researchers to run detailed rigid body simulations with contacts directly from Python, making MuJoCo easier to integrate into machine learning workflows. The library is compatible with MuJoCo version 2.1 and supports Linux and macOS, while Windows support has been deprecated. It provides utilities for loading models, running...
    Downloads: 2 This Week
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  • 21

    MAGeCK

    Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout

    MAGeCK2 is here: https://github.com/davidliwei/mageck2 Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology. For instructions and documentations, please refer to the wiki page. MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute/Harvard School of Public Health, and is maintained by Wei Li lab at Children's National Medical Center. ...
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    Downloads: 95 This Week
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  • 22
    Argos Translate

    Argos Translate

    Open-source offline translation library written in Python

    Argos Translate uses OpenNMT for translations and can be used as either a Python library, command-line, or GUI application. Argos Translate supports installing language model packages which are zip archives with a ".argosmodel" extension containing the data needed for translation. LibreTranslate is an API and web-app built on top of Argos Translate. Argos Translate also manages automatically pivoting through intermediate languages to translate between languages that don't have a direct translation between them installed. ...
    Downloads: 95 This Week
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  • 23
    aseryla

    aseryla

    Aseryla code repositories

    This project describes a model of how the semantic human memory represents the information relevant to the objects of the world in text format. It provides a system and a GUI application capable of extracting and managing concepts and relations from English texts. https://aseryla2.sourceforge.io/
    Downloads: 0 This Week
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  • 24
    U-Net Fusion RFI

    U-Net Fusion RFI

    U-Net for RFI Detection based on @jakeret's implementation

    ...The primary improvements to this code base include a training and evaluation framework, along with a fusion based approach to detection, combining a number of models (currently hard coded to two trained models) along with Sum Threshold as an additional "expert." Additional work is being done to add custom layers to this model for further experimentation, including Squeeze/Excitation layers (unimplemented.) Sum Threshold (in fusion as an expert, and in testing as a comparison) requires the use of AOFlagger by Andre Offringa. You can find this code at https://gitlab.com/aroffringa/aoflagger. This project will use the aoflagger program within the code, so you may need to ensure that any environment variables are set for aoflagger before use. ...
    Downloads: 0 This Week
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  • 25
    Pytorch Points 3D

    Pytorch Points 3D

    Pytorch framework for doing deep learning on point clouds

    ...We aim to build a tool that can be used for benchmarking SOTA models, while also allowing practitioners to efficiently pursue research into point cloud analysis, with the end goal of building models which can be applied to real-life applications. Task driven implementation with dynamic model and dataset resolution from arguments. Core implementation of common components for point cloud deep learning - greatly simplifying the creation of new models. 4 Base Convolution base classes to simplify the implementation of new convolutions. Each base class supports a different data format.
    Downloads: 0 This Week
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