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Showing 1191 open source projects for "unix tool windows"
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OmicSelector
Feature selection and deep learning modeling for omic biomarker study
OmicSelector is an environment, Docker-based web application, and R package for biomarker signature selection (feature selection) from high-throughput experiments and others. It was initially developed for miRNA-seq (small RNA, smRNA-seq; hence the name was miRNAselector), RNA-seq and qPCR, but can be applied for every problem where numeric features should be selected to counteract overfitting of the models. Using our tool, you can choose features, like miRNAs, with the most significant... -
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Jljp
Calculates the voltage across a liquid junction between two solutions
An analogous project written in C# can be found here: https://github.com/swharden/JLJP Liquid junction potential calculator. It's a tool for scientists and engineers who have to do with electrochemistry and electrokinetics. When two solutions containing ions are put into contact, possibly through a porous diaphragm, a voltage develops across them. The calculation of the voltage is not trivial. The program is written in Java. Includes classes that can be included in other programs, together... -
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MANUELA
Tool for assessment of environmental services on farm scale.
The "MANUELA"-project is designed to enable farmers for the documentation of the environmental services provided by their holdings. Localization, description and evaluation of these services are joined within an open source Geographic Information System (OpenJUMP) and a PostgreSQL database. -
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BAS - Astrolab
Open Source Astronomy Tools
Open source tool to assist with study of Astronomy, Astrophysics and Cosmology. To include usefull data and calculation of common equations used in the basic study of these subjects. Later versions may interface to other existing Astronomy software t -
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GatcomSUMO
Automates the building of VANET simulations using SUMO and OMNeT++
GatcomSUMO is a multi-platform application that facilitates the building of VANET simulations using the SUMO traffic simulator and the OMNeT++ network simulator. The tasks related to the generation of abstract or synthetic scenarios, the download and conversion of network scenarios based on real maps (e.g. from OpenStreetMap), the route creation process, and the vehicles mobility modelling are integrated in a user-friendly graphical interface. This tool performs the necessary actions... -
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PlateEditor
PlateEditor, a free web application to work with multi-well plates
PlateEditor is a free web application to work with multi-well plates, from creation of layouts to data visualization and aggregation. It is primarily designed as a tool to help scientists working in the field of biology to simplify and fasten the process of data analysis. It is fully client-side: files are never transferred to the server, ensuring complete security and privacy of research data. It doesn't require any installation. - PlateEditor is available at this address: https... -
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TabuVis
An Interactive Visualisation for Tabular Data
TabuVis is a comprehensive visual analysis tool that provides a flexible, customizable and interactive visualization for tabular (or multidimensional) data. It utilizes scatter-plot visualization approach to provide comprehensive and interactive views for different attribute mappings. It provides single scatter-plot and multiple scatter-plots together with Map (GIS) capability. The project is available at: http://staff.scem.uws.edu.au/~vinh/projects/TabuVis/ Related publications: https... -
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Cylindrical Alignment App
Arranges alignments in a rotating cylinder
The Cylindrical Alignment App is the successor to Cylindrical BLAST Viewer. Similarly, it arranges search or other comparisons, against their "axis". Searches can be made by Basic Local Alignment Search Tool, ClustalW, or Gene Machine to name a few. This version does not require downloading or installing Java3D, and has more modern GUI features. -
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Orbit Determination Toolbox (ODTBX)
Advanced mission simulation and analysis tool
The Orbit Determination Toolbox (ODTBX) is developed by the Navigation & Mission Design branch at NASA Goddard Space Flight Center as an advanced mission simulation and analysis tool used for concept exploration, proposal, early design phase, and/or rapid design center environments. ODTBX functions and utilities are combined in a flexible architecture that allows for modular development of navigation algorithms and simulations. The core ODTBX functionality is realized through a set... -
Red Hat Enterprise Linux on Microsoft AzureRed Hat Enterprise Linux (RHEL) on Microsoft Azure provides a secure, reliable, and flexible foundation for your cloud infrastructure. Red Hat Enterprise Linux on Microsoft Azure is ideal for enterprises seeking to enhance their cloud environment with seamless integration, consistent performance, and comprehensive support.
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Amide's a Medical Image Data Examiner: Amide is a tool for viewing, registering, and analyzing anatomical and functional volumetric medical imaging data sets.
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Deed Map
Deed and people mapping for genealogists and local historians
... to people through business transactions. This “Deed Map” application is built using an Open Source tool TiddlyWiki and a key component TiddlyMap which provides a graphical representation of the relationships. -
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JQM Java Quine McCluskey
JQM - Java Quine McCluskey for minimization of Boolean functions.
Java Quine McCluskey implements the Quine McCluskey algorithm with Petrick’s Method (or the method of prime implicants) for minimization of Boolean functions. This software can be used both for learning and solving real problems. As a learning/teaching tool, it presents not only the results but also how the problem was solved as well as how to use Karnaugh Maps to solve the problem. Up to sixteen functions of sixteen variables can be minimized. A graphical interface is provided for entering... -
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A set of cross-platform tools for connecting via TCP/IP to the VOEvent transient astronomy alert network. Tools include a receiver/broker, a sender/publishing tool, and a VOEvent message checker. Runs on Linux, Mac OS X and Microsoft Windows.
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This project moved to GitHub in 2021 and is available at: https://cbrinkrolf.github.io/VANESA/ This tool is a platform-independent software to create individual pathways and to examine biological networks of distributed, heterogeneous data sources, e.g. KEGG, BRENDA. VANESA also offers Petri net modeling of extended hybrid Petri nets which can be also simulated using the OpenModelica framework.
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Curv
A language for making art using mathematics
Curv is a programming language for creating art using mathematics. It's a 2D and 3D geometric modelling tool that supports full colour, animation and 3D printing. Curv is a simple, powerful, dynamically typed, pure functional programming language. Curv is easy to use for beginners. It has a standard library of predefined geometric shapes, plus operators for transforming and combining shapes. These can be plugged together like Lego to make 2D and 3D models. Coloured shapes are represented using... -
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Karto
Tool to work on map data, to check the data and generate your own maps
Karto allows to calibrate a scanned map (or aerial photos) with some known geo-points (Lambert, UTM, ...). After that, you can add any points (GPS points) in the map to build your own map. You can also add a transparent GIF image in the map after calibration (cave, mines, roads, ...). You can realize your own cartes with the data you add inside adding/showing/hiding layers of data. You can import/export your data files (after checking and correcting them) in differents formats. -
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The FMI++ Library
A High-level Utility Package for FMI-based Software Development
The Functional Mock-up Interface (FMI) specification intentionally provides only the most essential and fundamental functionalities in the form of a C interface. On the one hand, this increases flexibility in use and portability to virtually any platform. On the other hand, such a low-level approach implies several prerequisites a simulation tool has to fulfill in order to be able to utilize such an FMI component. The FMI++ library addresses this problem for models and tools with interfaces... -
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Netgen Mesh Generator
NETGEN is an automatic 3d tetrahedral mesh generator
NETGEN is an automatic 3d tetrahedral mesh generator. It accepts input from constructive solid geometry (CSG) or boundary representation (BRep) from STL file format. The connection to a geometry kernel allows the handling of IGES and STEP files. NETGEN contains modules for mesh optimization and hierarchical mesh refinement. Netgen is open source based on the LGPL license. It is available for Unix/Linux and Windows. -
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myNetPCB
Community driven PCB Layout and Schematic capture software
PCB Layout and Schematic capture tool for Win/Linux/Mac. Source code at https://github.com/sergei-iliev/myNetPCB -
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Design PCR primers from DNA sequence. Widely used (190k Google hits for "primer3"). From mispriming libraries to sequence quality data to the generation of internal oligos, primer3 does it. C&perl. Developers/testers/documenters needed.
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Hedgehog Lab
Run, compile and execute JavaScript for Scientific Computing
Hedgehog Lab is an open-source scientific computation tool in the browser. Before the development, Pleases make sure you are already installed and enabled the yarn. Once cloned, switch to the dev branch and navigate to the folder by typing cd hedgehog-lab and then running the provided commands. On each run the program compiles and it takes time. Please wait until it shows "Compiled successfully!" and instructions about with which IP:PORT to connect. -
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Linguistic Analyzer
The Linguistic Analyzer is a tool for corpus analysis and comparison
The Linguistic Analyzer (Almuhalil Alloghawy) is a free tool designed by a team from Al-Imam Muhammad bin Saud islamic university that can be used for corpus analysis and comparison in terms of the several linguistic characteristics, such as frequency lists generation, concordances, collocation extraction, the difference between two words, and keyword identification. -
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QWait (theme park visitor simulator)
Simple theme park visitor simulator
Inspired by a youtube video, I thought I'd have a go at building a theme park visitor simulator. A command-line driven tool that can output a range of CSV data. A couple of Excel templates are included so you can quickly see some graphs. I've included data for four famous theme parks, and one generic test park. I'll add more as I get access to real-world data. What's included: Visitor will travel from ride to ride at a reasonably realistic speed. There are several different types... -
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XISMuS
X-Ray Imaging Software for Multiple Samples
... the software v2.4.2 introduces Image Viewer to Mosaic v2.4.1 fixes an issue in merging H5 or EDF datasets with Mosaic Full changelog at https://linssab.github.io/history X-Ray Fluorescence Imaging Software for Multiple Samples is an open source software to manipulate and study macro-X-Ray Fluorescence (MA-XRF) datasets. XISMuS also works as a sample management tool, where you can easily change between datasets (samples) and compare, cross-interact and normalize them. -
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Virtual Reflectometer
Simulates basic reflectometer scans with X ray tracing.
With Virtual Reflectometer (VR), you can simulate the basic alignment scans of a basic X ray reflectometer (diffractometer) with a Goebel mirror using ray tracing. With this program, you can characterize reflectometers and get a reflectometer-dependent overillumination correction for X Ray Reflectivity (XRR) scans. The pogram serves as an educational tool for explaining alignment and for a proper overillumination correction of XRR data. !!Paper will be referenced!!. VR can be run by code...