Open Source Java Scientific/Engineering Software - Page 54

The Dataverse Network is a Java EE5 app that enables researchers to share data on-line. It provides data citation standards, facilitates preservation, distribution and replication of data, and includes statistical analysis. More at: http://thedata.org

DawNLITE is a Natural-Language-based Image Transmoding Engine. The software transforms an image to a video as recorded by a virtual camera panning and zooming over the image, following a natural language text description of the image.

DawgPack is an ultra-fast, Cloud-based tool that maps many high coverage genomes and performs analysis to find clues for pathogenesis. It will integrate CNV, SNP, RNA-Seq and ChIP-Seq analyses.

Insalling the plugin it is possible to direct data collected by data gatherers into a MySQL database. The database connection is configured via a wizzard. The whole process is similar to putting data to a file.

This project is an extension to Jadex Framework and aims to develop an autonomous agent which is using adaptive decision making architecture based on Thagard’s deliberative coherence.

DeHinter is an enhanced file-sharing client that exploits the topology of the spontaneous communities of like-minded people to enable personalized social filtering techniques. The P2P layer is based on the Limewire Gnutella client.

DeNovoCheck is intended to be used for inheritance analysis in NGS tio data. For rare dominant Mendelian diseases, patient-parent trios are often used to reduce the number of candidate variants. The algorithm bases the inheritance prediction on the data available in the parental BAM files and allows for a fast and reliable selection of potential de novo variants.

Open data mining platform. Provides common architecture for algorithms of various types. Efficient processing of arbitrarily large volumes of data thanks to data streaming. Weka and Rseslib partially integrated. (www.debellor.org)

Decimal floating point library in Java. Provides decimal floating point math for Java via a clean, easy to understand implementation. Much easier to use than Big Decimal, nearly IEEE-854 compliant. Compatible with J2ME, so it can be used on PDAs/phon

The Decision Deck project aims at developing a generic decision aid platform composed of modular "software components". These software components implement the common functionalities of a large range of multiple criteria decision aid methods. This

DTreeJungle provides educational applets to teach the concepts of decision trees for regular pattern recognition.

Use statistical methods to analyze time-course data (gene expression microarray and RNA-seq data in particular, but not limited to). Apply significance tests to filter out only significant genes or time series. Cluster time series into similar groups. Generate network models, including linear or non-linear models. Variable selection and optimization routines included. Written in Scala and R. The application is a cross-platform desktop app with a simple GUI and is fully functional currently. The app was and is developed at the University of Rochester (http://cbim.urmc.rochester.edu) under the GPL 3.0 license. This is a fork of that project.

Book Shepherd helps to manage ebooks, articles, links and other electronic documents.

DSM Simulator is a set of tools written in Java to help electrical engineers and energy consummers to simulate the savings that the use of a Energy management Control System may bring to them according to their electrical equipment, the consumption profil

Dendrarium służy do wybierania i weryfikacji składnikowych drzew składniowych generowanych przez parser Świgra. System jest użytkowany w Instytucie Podstaw Informatyki PAN do tworzenia banku drzew składniowych dla języka polskiego Składnica.

Depth Explorer is a visual interactive tool for learning about Statistical Data Depth and evaluating depth measures.

A framework for highly customisable e-commerce: A system for automatically build an e-commerce interface supporting product´s contraints and properties.

This project tries to find geographical locations (formulated by GPS positions) for specific queries (eg 'art') in specific environments (eg 'Maastricht') by analyzing webpages.

DevLogger is a software framework used to collect, monitor, and log data from any number of instruments or input devices simultaneously. Initial support provides for serial connections to Radio Shack 22-812 multimeters and My Weigh HD Scales.

The Disease Simulation Framework (DiSiF) represents a spatial simulation environment for infectious viral disease spread. The framework currently embodies a very simple framework for simulation in 2D space with focus on SARS and the Common Flu.

This project is a thesis (diploma) from the University of Applied Science Aalen. It contains a logic simulator for digital technique.

This projects concentrates software for setting up a chemical dictionary website.

DigiJSim is a simulator for Logial Circuits. It is able to create and simulate logical circuits easily. So it is very helpfull for educational purposes.

Working with a paper-based BOM is painful. This effort will build upon the Java Swing Tree structure.