Berkeley Quantum Synthesis Toolkit
kSNP4 does SNP discovery and SNP annotation from whole genomes
Neutrality tests using the SNP site frequency spectrum
PubMed ID: 29562348 / DOI: 10.1093/nar/gky175
Binary files for variantkey
Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller
SNP calling, annotation and gene/transcripts expression quantification
Format converting tool for genotype Data (e.g.PLINK-MACH,MACH-PLINK)
Collaborative Computing Project for NMR (CCPN)
REHUNT (Restriction Enzymes HUNTing)
Viral Quasispecies Reconstruction software based on QSdpR algorithm
Exhaustive search for third order epistatic interactions using CUDA
Comparative analysis of haploid next-generation genome sequence data
Analyze and change GPS coordinates and time in digital pictures
Rechentrainer - Lernprogramm zum Üben der Grundrechnungsarten
Virtual Microdissection for SNP calling
Automatically design primers to genes/coordinates using primer3.
Generate complex SNP models and heterogeneous datasets
Prediction of SNP > SAP; generation of proteotypic peptides
Design of target-specific primers for bis. sequencing of CpG-islands
High-Quality methylation maps and SNV calling from BS-Seq experiments