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    SPANDx

    SPANDx

    Comparative analysis of haploid next-generation genome sequence data

    SPANDx is your one-stop tool for identifying SNP and indel variants in haploid genomes using NGS data. SPANDx performs alignment of raw NGS reads against your chosen reference genome or pan-genome, followed by accurate variant calling and annotation, and locus presence/absence determination. SPANDx produces SNP and indel matrices for downstream phylogenetic analyses.
    Downloads: 1 This Week
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