Open Source BSD Scientific/Engineering Software - Page 3

Client software for users of the Automatic Packet Reporting System amateur radio network.

OpenMRS is a community-developed, open source, enterprise electronic medical record system. Our mission is to improve health care delivery in resource-constrained environments by coordinating a global community to creates and support this software.

TILP (formerly GtkTiLink) can transfer data between Texas Instruments graphing calculators and a computer. It works with all link cables (parallel, serial, Black/Gray/Silver/Direct Link) and it supports the TI-Z80 series (73..86), the TI-eZ80 series (83PCE, 84+CE), the TI-68k series (89, 92, 92+, V200, 89T) and the Nspire series (Nspire Clickpad / Touchpad / CX, both CAS and non-CAS). The project is now managed on Github, https://github.com/debrouxl/tilp_and_gfm . It uses the libti* libraries, https://github.com/debrouxl/tilibs . Install script for *nix: https://github.com/debrouxl/tilp_and_gfm/blob/master/tilp/trunk/build/scripts/install_tilp.sh

CLISP is a portable ANSI Common Lisp implementation and development environment by Bruno Haible. Interpreter, compiler, debugger, CLOS, MOP, FFI, Unicode, sockets, CLX. UI in English, German, French, Spanish, Dutch, Russian, and Danish.

GeoTools is an open source (LGPL) Java code library which provides standards compliant methods for the manipulation of geospatial data. GeoTools is an Open Source Geospatial Foundation project. The GeoTools library data structures are based on Open Geospatial Consortium (OGC) specifications.

GNUSim8085 is a simulator and assembler for the Intel 8085 Microprocessor. For downloading latest release please head to the website - https://gnusim8085.github.io/ For source code - https://github.com/GNUSim8085/GNUSim8085

Hunspell is a spell checker and morphological analyzer library and program designed for languages with rich morphology and complex compounding or character encoding. Hunspell interfaces: Curses, Ispell compatible pipe interface, OpenOffice.org UNO module

Emgu CV is a cross platform .Net wrapper to the OpenCV image processing library. Allowing OpenCV functions to be called from .NET compatible languages such as C#, VB, VC++, IronPython etc. The wrapper can be compiled in Mono and run on Windows, Linux, Mac OS X, iPhone, iPad and Android devices.

GCBASIC is an open-source BASIC compiler for 8 bit Microchip PIC, Atmel AVR legacy, AVRDx and LGT microcontrollers. Also included in the project is Graphical GCBASIC, an icon based editor for GCBASIC programs. This is a continuous release project. The latest release is always available. This will give you the most complete development toolchain to create and program 8-bit PIC, AVR and LGT microcontrollers. We have added new capabilities that make GCBASIC the easiest tool set available - supporting over 1300's microcontrollers with tools to make this fun and simple. Please see the download section for your options. We have two IDEs, we have just the compiler and we have a minimal install - it is your choice. Please see the homepage here: http://gcbasic.sourceforge.net and also see http://gcbasic.sourceforge.net/download.html for other GCBASIC download options.

An easy to use Java program that allows you to digitize data points off of scanned plots, scaled drawings, or orthographic photographs. Includes an automatic digitization feature that can automatically digitize many types of functional data.

wxMaxima is a cross-platform graphical front-end for the computer algebra system Maxima based on wxWidgets. It provides nice display of mathematical output and easy access to Maxima functions through menus and dialogs. This project has moved to github and can be reached at http://wxmaxima-developers.github.io/wxmaxima/

Program for downloading web source maps or local files maps for various programs or GPS devices. Terra Incognita™ main features: navigating through map by simple clicking generating OziExplorer, Kmz, JNX, GPSdash or TrekBuddy calibrated map file possibility to use many web map sources Google Maps™, Bing™, Open street map ... managing of waypoints or tracks saved in gpx and many other formats selected user defined map area for saving simplified and easy user interface downloading and saving maps on background automatic split of very large areas to many smaller map files

PonyProg is a serial device programmer based on some simple and cheap interfaces for the PC and a user friendly GUI available for WindowsXP/7/8/10 and Intel Linux. Its purpose is programming every serial device like eeproms and microcontrollers

BWA is a program for aligning sequencing reads against a large reference genome (e.g. human genome). It has two major components, one for read shorter than 150bp and the other for longer reads.

Integrated Development Environment for some microcontrollers based on 8051(e.g. AT89S8253). Supported languages are Assembly and C. It has its own simulator, assembler, editor and many other tools. See the project web site for more details and the newest updates.

Icarus Verilog is an open source Verilog compiler that supports the IEEE-1364 Verilog HDL including IEEE1364-2005 plus extensions.

Elmer is a finite element software for numerical solution of partial differential equations and multiphysical problems. It includes models of structural mechanics, fluid dynamics, heat transfer, electromagnetics etc. Elmer home is www.csc.fi/elmer

* Fast C++ library for linear algebra (matrix maths) and scientific computing * Easy to use functions and syntax, deliberately similar to Matlab / Octave * Uses template meta-programming techniques to increase efficiency * Provides user-friendly wrappers for OpenBLAS, Intel MKL, LAPACK, ATLAS, ARPACK, SuperLU and FFTW libraries * Useful for machine learning, pattern recognition, signal processing, bioinformatics, statistics, finance, etc. * Downloads: http://arma.sourceforge.net/download.html * Documentation: http://arma.sourceforge.net/docs.html * Bug reports: http://arma.sourceforge.net/faq.html * Git repo: https://gitlab.com/conradsnicta/armadillo-code

PyRx is a Virtual Screening software for Computational Drug Discovery that can be used to screen libraries of compounds against potential drug targets. PyRx enables Medicinal Chemists to run Virtual Screening from any platform and helps users in every step of this process - from data preparation to job submission and analysis of the results. While it is true that there is no magic button in the drug discovery process, PyRx includes docking wizard with easy-to-use user interface which makes it a valuable tool for Computer-Aided Drug Design. PyRx also includes chemical spreadsheet-like functionality and powerful visualization engine that are essential for Rational Drug Design. Please visits PyRx home page to learn more about PyRx and watch videos on how to use it.

Gpredict is a real-time satellite tracking and orbit prediction application. Gpredict can track an unlimited number of satellites and display the data in tables and various graphical view.

OpenJUMP is a community driven fork of JUMP the "Java Unified Mapping Platform" GIS software. The original JUMP was developed by Vivid Solutions, released under GPL2 in 2003 and discontinued in 2006. During 2004 already some enthusiastic developers joined together to enhance further the features of JUMP. They launched an independent development branch called OpenJUMP. The name gives credit to the original JUMP development, and at the same time describes the objectives of this project to be fully open to anyone wanting to contribute. These days OpenJUMP is developed and maintained by (some few) volunteers around the globe. If you need functionality or even better want to contribute you are very welcome to contact us at our mailing list.

Freemat is an interpreted, matrix-oriented development environment for engineering and scientific applications, similar to the commercial package MATLAB. Freemat provides visualization, image manipulation, and plotting as well as parallel programming.

Grassroots DiCoM is a C++ library for DICOM medical files. It is accessible from Python, C#, Java and PHP. It supports RAW, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntax. It comes with a super fast scanner implementation to quickly scan hundreds of DICOM files. It supports SCU network operations (C-ECHO, C-FIND, C-STORE, C-MOVE). PS 3.3 & 3.6 are distributed as XML files. It also provides PS 3.15 certificates and password based mecanism to anonymize and de-identify DICOM datasets.

BioSig is a software library for processing of biomedical signals (EEG, ECG, etc.) with Matlab, Octave, C/C++ and Python. About 50 different data formats are supported.

The Java RTree project aims to maintain an Java version of the RTree spatial indexing algorithm. See http://jsi.sourceforge.net for more information, and http://github.com/aled/jsi for latest development code.