Search Results for "graph" - Page 8
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Showing 244 open source projects for "graph"
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FABS
Fluorescence and absorption spectroscopy made easy
...FABS can perform any necessary calibration and image preprocessing. Experienced users have a number of more advanced options such as background subtraction, adjustments for nonlinearities in detector response, and graph smoothing. FABS was designed with students in mind, as a way to help high schoolers and undergraduates learn about spectroscopy without paying for expensive equipment and software. Accompanying this software is a hardware design, which can be used as a bare-bones spectrometer that will provide quantitative absorption and fluorescence emission spectra at an extremely low cost. ... -
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xPyder PyMOL Plugin
Analyze and visualize coupled residues and their networks in proteins
xPyder is a PyMOL plugin to analyze and visualize on the 3D structure dynamical cross-correlation matrices (DCCM), linear mutual information (LMI), communication propensities (CP), intra- and inter-molecular interactions (e.g. PSN), and more, to produce highly customizable publication-quality images. xPyder identifies networks (using concepts from graph theory, such as hubs and shortest path searching), compares matrices and focuses the analysis on relevant information by filtering the data using a modular, user-expandable plugin system that takes advantage of structural and dynamical information, contributing to bridge the gap between dynamical and mechanical properties at the molecular level. -
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NGSbinningpytools
Python tools for binning NGS scaffolds to various genomes.
Next generation sequencing has opened new avenues for sequencing prokaryotes which were difficult or either impossible to culture. Now, it is possible to sequence all organisms present in a metagenomic community. However, a critical problem is to determine the host organism for each genomic fragment present in the dataset. This project provides the computational tools for assigning the organismal identity for each genomic scaffold in the given dataset. For more detailed documentation... -
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BasisViewer
Browse and visualize your downloaded Basis Band B1 biometric data
This application allows you to graph your Basis data in several ways and allows you to easily move across dates, plot mulitple attributes simultaneously, and understand trends and answer questions. This application assumes you've already run the BasisRetriever application and downloaded your metrics in csv format. -
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TiCheatSheetGenerator
Ti Cheat Sheet Generator
This program allows you to, very easily, generate very nice cheat sheets for in your graphical calculator. These cheat sheets will be shown in the graph screen instead of the normal screen, which allows for smaller letters and thus more text per page. They also support multiple pages, so you can put a whole lot of text inside one single cheat sheet! IMPORTANT: Exiting the cheat sheet on the calculator is done by pressing enter. If you don't do this, the graph screen will still contain the text that was shown at the time of exiting. ... -
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Pyphant is a framework for scientific data analysis. It features a flexible plugin architecture allowing for the application in many different fields. For the analysis a graph of processing steps is constructed, that can be applied via the cli as well.
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This project develops a simple, fast and easy to use Python graph library using NumPy, Scipy and PySparse.
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steganoroute
Send steganographed text messages to mtr with fake hops in the network
Steganoroute is a tool to send steganographed text messages to another computer over the network. The receiver must make a traceroute to the sender using the mtr program (and pressing 'd' once to switch the display mode to the continuous graph). This tool, the sender, creates several fake hops and makes them answer the ICMP packets (or not) to write the letters one by one on the mtr client screen. -
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Mix
Mix is a tool to combine multiple assemblies from NGS data.
Mix is a tool that combines two or more draft assemblies, without relying on a reference genome and has the goal to reduce contig fragmentation and thus speed-up genome finishing. The proposed algorithm builds an extension graph where vertices represent extremities of contigs and edges represent existing alignments between these extremities. These alignment edges are used for contig extension. The resulting output assembly corresponds to a path in the extension graph that maximizes the cumulative contig length. Please note that Mix has moved to: https://github.com/massyah/MIX -
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sc2 battle.net spider
Player spider for Starcraft 2 battle.net data
A Starcraft 2 spider for all locales on battle.net; obtains ladder information, with persistence. Includes some functions to graph data and statistics, and show locale-wide ranks. REQUIRES PYTHON 2.6! -
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Lograph
Log text into graph on python and javascript.
Graphize logs on the web browser. Fast javascript implementation needed with large monitor use. -
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python dagger
File dependency graph evaluator in pure python.
Dagger evaluates file dependencies in a directed-acyclic-graph (DAG) like GNU make, but timestamps or hashes can be used on a per-file basis when evaluating which file nodes are up to date or stale. Use fast timestamp comparisons on large files when hashing is too slow, and hashing on small files. When hashing is used, it's stored in either a text file or sqlite database (in-memory at runtime is optional). -
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LinkChecker
check links in web documents or full websites
New Homepage: http://wummel.github.io/linkchecker/ Linkchecker features: - recursive and multithreaded checking and site crawling - output in colored or normal text, HTML, SQL, CSV, XML or a sitemap graph in different formats - HTTP/1.1, HTTPS, FTP, mailto:, news:, nntp:, Telnet and local file links support - restrict link checking with regular expression filters for URLs - proxy support - username/password authorization for HTTP, FTP -
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PacmanTree
Program for generating Arch Linux Pacman Manager dependencies graph
Program to help using Arch Linux Pacman package manager. Program using pydot (python interface for Graphviz http://code.google.com/p/pydot/) to generate graph of dependencies for package selected by user. -
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GraVol
Drawing-based volume calculator. GraVol=Graph Volume
GraVol is designed to aid archaeologists in calculating the volume of any revolved container, such as wheel-thrown pottery. It does this using only a drawing of the vessel, and a height or diameter measurement. Instruction video: http://www.youtube.com/watch?v=pC8VReY83q4 Documentation of development: faculty.berea.edu/pearcej/CSC493/projects-11/jonestra-final.pdf -
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InkPlot
Inkscape extension to add and edit GNUplot graphs
InkPlot is an extension (plugin) for the SVG Editor Inkscape to insert graphs from Gnuplot. It allows you to - preview the graph - add it as SVG into Inkscape - edit already generated graphs - use a preamble file for reusable style and commands - customize default settings in a config file -
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cancer_dynamics
Cancer Dynamics web
Website that shows the dynamics of a tumor by solving a system of ordinary differential equations. The results are two kind of graph images, and a gif file, being all of them available for download as a compressed file. -
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Motion Graphs in Blender
A Blender 2.6+ addon that aims to implement Motion Graphs
...This add-on implements motion graphs as described in Motion Graphs paper by Kovar, Gleicher, and Pighin from SIGGRAPH 2002. The add-on can import set of motion captured BVH files and construct a motion graph based on some given parameters. This motion graph can be stored in memory and used until Blender is running, or can be baked to a file in a compact format so that it can be retrieved later without the need of re-computation. This motion graph can be used to generate arbitrary length motions that is composed of frames from the original motions and some generated transition frames between them. ... -
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Skyscraper: a small suite of ultilities for dealing with hand histories & account information on skypoker. Amongst them: download your old hhs & convert them to a readable form, graph your tournament perfomance, and even collect hhs whilst you play.
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Graph-based Extraction and Summarization - a generic graph-based summarization framework. Basic functionality is provided - third-party modules can be plugged in.
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Search tool based on Tracker. Circare aims for a different way searching your Desktop, mixing together graph based data visualizations, RDF querys, metadata and descriptors gives you a complete interface to the (meta)Tracker indexer.
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A simple graphical tool made in Python that can graph your current Nvidia GPU temperature, fan speeds, usage, and memory. (Chartable information varies between GPU models).
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booggie brings object-oriented graph grammars into engineering - Based on the application of object-oriented graph grammars, engineering knowledge is formalized and becomes computable in order to solve design tasks.
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