Random Forest Assignment of Hosts
estimate natural variation and positive selection
Evidence Directed Gene Construction for Eukaryotes
Antibiotic Resistance Evolution Simulator
MiRDeep*
a noval Transcriptome optimization tool
GENPPI: standalone software for creating protein interaction networks
Robust identification of fusion genes in tumor transcriptomes.
Quality Assessment Tool for Genome Assemblies
Fusion gene detection pipeline bundled into a Singularity container.
Tab. S7 for CVP method
Software for non-alignment based analysis of DNA and protein sequences
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout
NGS Pipeline and Automated Mutation Analysis
A pipeline to define allele-specific genomic features
Somatic fusion-genes finder for RNA-seq data
ChIP-BIT2 detects weak binding sites of TFs or HMs.
The dataset and codon project files are available here.
A package for functional annotation for metagenomes