Showing 127 open source projects for "raw"

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  • 1
    FastQC

    FastQC

    A quality control analysis tool for high throughput sequencing data

    FastQC is a quality control analysis tool designed to spot potential problems in high throughput sequencing datasets. Its goal is to provide a simple way by which to check the quality of raw sequence data coming from high throughput sequencing pipelines. It does this by running a modular set of analyses on one or more raw sequence files in fastq or bam format. It then produces a report summarizing the results, and highlighting any areas where the library may appear unusual. This should then direct you to where your data may have problems and allow you to take necessary steps to correct it before doing any further analysis. ...
    Downloads: 62 This Week
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  • 2
    Planetiler

    Planetiler

    Flexible tool to build planet-scale vector tilesets

    ...Planetiler aims to be fast and memory-efficient so that you can build a map of the world in a few hours on a single machine without any external tools or database. Vector tiles contain raw point, line, and polygon geometries that clients like MapLibre can use to render custom maps in the browser, native apps, or on a server. Planetiler packages tiles into an MBTiles (SQLite) or PMTiles file that can be served using tools like TileServer GL or Martin or even queried directly from the browser. See awesome-vector-tiles for more projects that work with data in this format. ...
    Downloads: 20 This Week
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  • 3
    GROBID

    GROBID

    A machine learning software for extracting information

    GROBID is a machine learning library for extracting, parsing, and re-structuring raw documents such as PDF into structured XML/TEI encoded documents with a particular focus on technical and scientific publications. First developments started in 2008 as a hobby. In 2011 the tool has been made available in open source. Work on GROBID has been steady as a side project since the beginning and is expected to continue as such.
    Downloads: 14 This Week
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  • 4
    QR Code generator library

    QR Code generator library

    High-quality QR Code generator library in Java, TypeScript/JavaScript

    This project aims to be the best, clearest library for generating QR Codes. My primary goals are flexible options and absolute correctness. The secondary goals are compact implementation size and good documentation comments. This work is an independent implementation based on reading the official ISO specification documents. I believe that my library has a more intuitive API and shorter code length than competing libraries out there. The library is designed first in Java and then ported to...
    Downloads: 18 This Week
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  • Build Agents and Models on One Platform Icon
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  • 5
    Chronicle Wire

    Chronicle Wire

    Low Garbage Java Serialisation Library that supports multiple formats

    Chronicle Wire is a Wire Format abstraction library. Chronicle Wire uses Chronicle Bytes for bytes manipulation, and Chronicle Core for low-level JVM access. Configuration includes aliased type information. This supports easy extension by adding new classes/versions, and cross-platform using type aliasing. By supporting types, a configuration file can bootstrap itself. You control how the configuration file is decoded. See example Queue Enterprise config. To send the configuration of a...
    Downloads: 12 This Week
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  • 6
    Java JWT

    Java JWT

    Java implementation of JSON Web Token (JWT)

    ...The library implements JWT Verification and Signing using several algorithms. The Algorithm defines how a token is signed and verified. It can be instantiated with the raw value of the secret in the case of HMAC algorithms, or the key pairs or KeyProvider in the case of RSA and ECDSA algorithms. Once created, the instance is reusable for token signing and verification operations. When using RSA or ECDSA algorithms and you just need to sign JWTs you can avoid specifying a Public Key by passing a null value. ...
    Downloads: 4 This Week
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  • 7
    FFmpeg CLI Wrapper for Java

    FFmpeg CLI Wrapper for Java

    Java wrapper around the FFmpeg command line tool

    ffmpeg-cli-wrapper is a Java library that provides a structured interface for interacting with FFmpeg and FFprobe through command-line execution. It allows developers to construct multimedia processing commands programmatically using object-oriented patterns instead of raw shell commands. The library supports tasks such as transcoding, probing media files, and extracting metadata while maintaining clarity and type safety. It includes built-in support for parsing FFprobe output into Java objects, making it easier to work with media information in applications. ffmpeg-cli-wrapper is designed to be lightweight and does not bundle FFmpeg itself, giving developers flexibility in managing dependencies. ...
    Downloads: 3 This Week
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  • 8
    Stanford CoreNLP

    Stanford CoreNLP

    Stanford CoreNLP, a Java suite of core NLP tools

    ...CoreNLP enables users to derive linguistic annotations for text, including token and sentence boundaries, parts of speech, named entities, numeric and time values, dependency and constituency parses, coreference, sentiment, quote attributions, and relations. CoreNLP currently supports 6 languages, Arabic, Chinese, English, French, German, and Spanish. The centerpiece of CoreNLP is the pipeline. Pipelines take in raw text, run a series of NLP annotators on the text, and produce a final set of annotations. Pipelines produce CoreDocuments, data objects that contain all of the annotation information, accessible with a simple API, and serializable to a Google Protocol Buffer. CoreNLP generates a variety of linguistic annotations, including parts of speech, named entities, dependency parses, and coreference.
    Downloads: 9 This Week
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  • 9
    docker-java

    docker-java

    Java Docker API Client

    ...Should you need to customize the Jackson's ObjectMapper used by docker-java, you can create your own DockerClientConfig. Once you decided which transport to use, you will need to instantiate an HTTP client. Once you have an HTTP client, you can make raw requests to the Docker daemon directly. To get an instance of DockerClient, you need to pass both DockerClientConfig and DockerHttpClient.
    Downloads: 4 This Week
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    MongoDB Atlas runs apps anywhere

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  • 10
    Netty

    Netty

    An event-driven asynchronous network application framework

    ...Its ByteBuf abstractions, buffer pooling, and zero-copy techniques help reduce GC pressure and improve throughput under heavy I/O. Support for common protocols—HTTP/1.1, HTTP/2, WebSocket, and raw TCP/UDP—makes it a foundation for RPC frameworks, proxies, and messaging systems. Pluggable transports and native integrations (like epoll or kqueue where available) allow fine-tuning for different operating systems. With robust resource management, leak detection, and extensive testing, Netty is widely chosen when low latency, scalability, and control over the I/O stack are required.
    Downloads: 2 This Week
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  • 11
    Brokk

    Brokk

    Brokk brings code intelligence to AI

    Brokk is a code intelligence assistant framework designed to let large language models (LLMs) understand code semantically (not just as raw text) so that they can work effectively on large codebases that don’t fit wholly in a prompt context. It helps bridge the gap between LLMs and real-world engineering code by offering tooling to index, analyze, query, and augment code context, so that AI can meaningfully reason about existing code, suggest edits, and navigate across projects. ...
    Downloads: 1 This Week
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  • 12
    Aleph

    Aleph

    Asynchronous streaming communication for Clojure

    Aleph is an asynchronous I/O framework for Clojure built atop Netty, offering efficient, non-blocking network programming with support for HTTP, raw TCP/UDP, and streaming through Manifold streams. Aleph follows the Ring spec fully and can be a drop-in replacement for any existing Ring-compliant server. However, it also allows for the handler function to return a Manifold deferred to represent an eventual response. This feature may not play nicely with synchronous Ring middleware, which modifies the response, but this can be easily fixed by reimplementing the middleware using Manifold's let-flow operator. ...
    Downloads: 0 This Week
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  • 13
    nmrshiftdb2
    ...It allows for spectrum prediction (13C, 1H and other nuclei) as well as for searching spectra, structures and other properties. The nmrshiftdb2 software is open source, the data is published under an open content license. The core of nmrshitdb2 are fully assigned spectra with raw data and peak lists (we have pure peak lists as well). Those datasets are peer reviewed by a board of reviewers. The project is supported by a scientific advisory board. nmrshiftdb2 is part of the NFDI4Chem initiative (https://nfdi4chem.de/) and will provide a component for a curated repository there. Please consult the documentation for more detailed information.
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    Downloads: 624 This Week
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  • 14
    Grassroots DICOM

    Grassroots DICOM

    Cross-platform DICOM implementation

    Grassroots DiCoM is a C++ library for DICOM medical files. It is accessible from Python, C#, Java and PHP. It supports RAW, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntax. It comes with a super fast scanner implementation to quickly scan hundreds of DICOM files. It supports SCU network operations (C-ECHO, C-FIND, C-STORE, C-MOVE). PS 3.3 & 3.6 are distributed as XML files. It also provides PS 3.15 certificates and password based mecanism to anonymize and de-identify DICOM datasets.
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    Downloads: 212 This Week
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  • 15
    Open Camera

    Open Camera

    Camera app for Android.

    Open Camera is an Open Source Camera app for Android(TM) phones and tablets. * Get it on Google Play: https://play.google.com/store/apps/details?id=net.sourceforge.opencamera * Get it on F-Droid: https://f-droid.org/en/packages/net.sourceforge.opencamera/ * Or you can download the APK/source directly, see "Files" above. Android, Google Play and the Google Play logo are trademarks of Google LLC.
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    Downloads: 1,587 This Week
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  • 16
    FastPhotoTagger

    FastPhotoTagger

    A fast way to set photo metadata tags

    ... - Define hierarchical keywords - View images and slideshows that display tags as captions - Create and search a metadata database FastPhotoTagger has versions for PC and Android. FastPhotoTagger uses ExifTool to read & write metadata, HyperSQL to manage its database, dcraw to display DNG & RAW, and ImageMagick to display TIFF. WEBP, & HEIC.
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    Downloads: 60 This Week
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  • 17
    mzMatch is a Java collection of small commandline tools specific for metabolomics MS data analysis. The tools are built on top of the PeakML core library, providing mass spectrometry specific functionality and access to the PeakML file format.
    Downloads: 1 This Week
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  • 18

    Serial-Master

    Serial/TCP terminal: ANSI color, logging, HEX input, & XLSX docs.

    ...Core Communication & Debugging Features Serial-Master is not just a basic terminal; it's a powerful tool with specialized features for data analysis and control: Advanced ANSI Color Display: Enhance data readability with support for ANSI color codes sent over the serial port. This feature can be conveniently enabled or disabled in the settings. Flexible Logging: Capture data accurately using two distinct logging modes: Raw Port Logging: Records the raw, unprocessed data stream directly from the COM port. Terminal Logging: Logs only the decoded (displayable) characters as seen in the terminal window Custom HEX Input: Allows engineers and power users to transmit precise, non-standard control characters by entering their HEX values
    Downloads: 3 This Week
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  • 19
    BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. Please cite the BRIG paper if BRIG is used to generate figures for publications: NF Alikhan, NK Petty, NL Ben Zakour, SA Beatson (2011) BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons, BMC Genomics, 12:402. PMID: 21824423
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    Downloads: 48 This Week
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  • 20
    Magic Assistant
    Magic Assistant is multi-platform application for "Magic: The Gathering" players. Includes Card Browser, Library Organizer, Deck Builder and MTG Tournament Manager. Comes with MTG cards database and allows web updates. See home page for details. Sadly this project is no longer active, it is up for adoption.
    Downloads: 9 This Week
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  • 21
    SignServer
    The SignServer is an application for server side signatures called by other systems. It is flexible and can be customized to specific needs. The SignServer have a ready to use TimeStamp server and signers for PDF, XML, ODF, PGP, OOXML and MRTD (ePassport DS).
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    Downloads: 15 This Week
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  • 22
    The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
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    Downloads: 27 This Week
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  • 23
    ResCarta

    ResCarta

    Archive your personal history

    ResCarta Toolkit offers an open source solution to creating, storing, viewing, and searching digital collections. Applications in the toolkit let users create and edit metadata, convert data to open standard ResCarta format, index and host collections.
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    Downloads: 9 This Week
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  • 24
    Joget

    Joget

    AI Powered Open Source Platform to Easily Build Enterprise Web Apps

    Joget offers an open-source, AI-powered platform that converges no-code/low-code development with AI to rapidly build and customize enterprise applications at scale. By combining AI with visual app builders—not raw code—Joget makes app generation faster, safer, and more accessible for everyone. With Generative AI and Agentic AI capabilities, Joget Intelligence enables organizations to automate and enhance processes while maintaining oversight and compliance. Unlike typical AI code generation, Joget's visual-first approach ensures applications are maintainable and governed within collaborative human workflows. ...
    Downloads: 32 This Week
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  • 25
    Orbit

    Orbit

    ORBIT : Operating Business Intelligence Tool

    ORBIT : Operating Business Intelligence Tool Making Data Accessible Through Centralized Database Access ORBIT is a business intelligence tool designed to make data accessible to a broad audience within your company by centralizing access to databases. With this application, users can easily create reports, perform interactive analyses, and extract insights from raw data. The application simplifies data handling by providing easy-to-use features for non-technical users while maintaining flexibility for advanced queries.
    Downloads: 9 This Week
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