Search Results for "tree" - Page 2
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Showing 414 open source projects for "tree"
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Scaffold Hunter is a JAVA-based software tool for the analysis of structure-related biochemical data. It enables generation of and navigation in a scaffold tree hierarchy annotated with various data.
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Tree Visualisation with Visual Cues
Tree Visualisation with Visual Cues
This project extends a previous work on node link tree visualisation and interaction by providing visual clues on hidden structures. We adopt DOITree from Prefuse package (https://github.com/prefuse/Prefuse), a multi-focal tree layout algorithm, for exploring large hierarchical structures. Related publications: https://www.sciencedirect.com/science/article/pii/S1045926X1630009X https://ieeexplore.ieee.org/stamp/stamp.jsp? -
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Divide and Conquer Treemaps
Divide and Conquer Treemap Visualisation
The project develops new new techniques and algorithms for quickly partitioning and visualizing very large hierarchical structures within a variety of arbitrary shapes and space using Divide and Conquer approach for Treemaps. Related publications: https://www.sciencedirect.com/science/article/pii/S1045926X1500066X https://dl.acm.org/doi/pdf/10.1145/2493102.2493112 -
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The CSS Parser is implemented as a package of Java classes, that inputs Cascading Style Sheets source text and outputs a Document Object Model Level 2 Style tree. Alternatively, applications can use SAC: The Simple API for CSS. Its purpose is to allow developers working with Java to incorporate Cascading Style Sheet information, primarily in conjunction with XML application developments. The CSS Parser package includes parsers for: * Cascading Style Sheets Level 3, * Cascading Style Sheets Level 2.1, * Cascading Style Sheets Level 2, and * Cascading Style Sheets Level 1 The parser is freely available and without charge and is licenced under the terms of the Apache License, Version 2.0.
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JPrefs
Java Preferences Editor
JPrefs is a Java preferences editor that allows viewing and editing of preferences. JPrefs visualizes all Java preferences of your computer in a tree. You can navigate through the tree similar to a file manager GUI and examine and edit all preferences. There are two trees available, user tree and system tree. Switching between them is simply easy by JPrefs menus or tool bar buttons. Also exporting and importing of preferences to and from XML files is supported by JPrefs as well. ... -
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Cyclops
An advanced platform for writing functional applications in Java 8
Fast purely functional datastructures (Vector, Seq / List, LazySeq / LazyList, NonEmptyList, HashSet, TreeSet, TrieSet, HashMap, LinkedMap, MultiMap, TreeMap, BankersQueue, LazyString, Discrete Interval Encoded Tree, Zipper, Range, Tree, DifferenceList, HList, Dependent Map). Structural Pattern Matching API (deconstruct algebraic product and sum types). Improved type safety via the removal of unsafe APIs -- E.g. Unlike Optional, Option has no get method (which could throw a null pointer) -- New data structures do not support operations that would throw exceptions (you can't call head on an empty list for example). ... -
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treeshell
Eclipse Shell Script Editor with Tree View. Opens No-Extension-Files.
An Eclipse editor for shell (bash) scripts. Features: 1) Content outline with tree view for functions. 2) Association with files without an extension. 3) Jumping between if-then-else-elif-fi, do-done, etc. (CTRL+SHIFT+P jump forwards, CTRL+ZERO jump backwards.) 4) Easily copy the file-path of the edited file (CTRL+SHIFT+9). It's convenient to paste and execute in a console then. Installation instructions: NOTE1: these instructions won't work if you used an online installer for eclipse! ... -
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JQuickBase
elementary database files for Java, B+ tree index files, ISAM
Java API to realize quick ISAM (Index Sequential Access Method) functionality for application in the file system. Includes scalable database files w/ space recovery and variable record length, scalable B+Tree index files. Supports file backup and restore. Two package types: one with and one without strong file encryption using Twofish algorithm and state-of-the-art encryption technology. -
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Next Generation Programming
Compose Software Without Writing Any Programing Code
"Next Generation Programming - Programming Without Coding Software" is a drag-drop wizard for creating simple or complex applications without writing any programming language code The Software is coded/designed with "Java Programming Language" for novice/expert programmers; Programmers can write softwares with visual tools : drag-drop components;visual editors... Programmers can use the software to compose of simple/complex applications : Database programs, circuit design, generate... -
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Toxtree: Toxic Hazard Estimation
Toxicity prediction for chemical compounds
...The latest version includes the following toxicity prediction modules: -Cramer rules (oral toxicity) -Toxicity mode of action via Verhaar scheme -Skin irritation and Eye irritation prediction -Benigni / Bossa rulebase for mutagenicity and carcinogenicity prediction -START biodegradation and persistence prediction -Skin sensitisation reactivity domain -Kroes TTC Decision tree -SMARTCyp - Cytochrome P450-Mediated Drug Metabolism and metabolites prediction -Structure Alerts for the in vivo micronucleus assay in rodents (ISSMIC) -Structural Alerts for Functional Group Identification (ISSFUNC) -Structural alerts associated with covalent protein binding and DNA binding. - Ames mutagenicity Toxtree provides a plugin framework to incorporate different approaches to the estimation. ... -
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EncCon Tree Visualization
A Enclosure+Connection technique
An Enclosure+Connection technique for layout and navigation of Hierarchical Information. The layout uses rectangular enclosure partitioning to ensure the space efficiency, and the navigation is a focus+context navigation technique using semi-transparency approach. Related Publications: https://opus.lib.uts.edu.au/bitstream/10453/4003/3/2005003228.pdf -
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Space-Otimized Tree
An Enclosure+Connection Visualization Technique for Hierarchical Data
A Enclosure+Connection technique for layout and navigation of Hierarchical Information. The layout uses "angular" enclosure partitioning approach where the child nodes are located around their parent. The program was written in Java Applet. Related Publications: https://ieeexplore.ieee.org/abstract/document/1173152 https://journals.sagepub.com/doi/abs/10.1057/palgrave.ivs.9500031 -
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Nexplorer is a web-based phylogenetic browser, used to view and edit comparative data, and ideal for creating publication-quality views in which the tips of a tree are aligned with the rows of a character matrix (e.g., a sequence alignment).
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...TSMiner has three key modules: first, predicting the time-specific activated/repressed transcription factors (TFs); second, predicting the biological pathways associated with the predicted TFs; third, merging the TFs and pathways into time-specific regulatory networks. TSMiner provides extensive interactive operations to help users explore the results of each module. For example, we made use of the tree structure map developed by the Dynamic Regulatory Events Miner (DREM) (Ernst et al. 2007) to show the time-specific TFs. And we developed an interactive network map to help users explore the time-specific regulatory networks.
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Program for creating Verilog synthesizable XOR trees for high performance designs. Supports creation of Hamming Code (ECC) generators, checkers, and GF2 Multipliers.
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Crispy Synced Notes
A note taking program with WebDAV sync
An note taking program with WebDAV sync capabilities. It works on a local (and WebDAV) directory and shows the items (text/image/binary) in a tree view. Any changes are reflected in the file system directly. Features: - group notes and images in a tree structure (using folders) - can work on any directory on your machine - technically works like a file browser with inline text editing - synchronizes with any WebDAV server (optionally using SSL/TLS) - allows one-way and two-way synchronization - allows to encrypt your files locally and remote using AES256 - multi language support You can obtain the full source code at: https://crispy-cow.de/git/CrispySyncNote.git Latest changes: 2.1.0: Updated for Java 9 and up 2.0.2: Added more UI translation, updated greek language (thanks to geogeo) 2.0.1: Bugfix: Sync state is now copied when duplicating workspace due to change in encryption settings -
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Json Node Tree Library
Represents JSON doc as a nodes tree for transforms like XPATH & XSLT.
Json Node Tree framework is provisioning of transformation operations for JSON documents similar XML XPATH and XSLT. The framework parses textual JSON document to nodes tree that represents JSON entity: object, array or value of primitive type. Generated tree allows to modify values of nodes and/or structure of the given JSON document. Representation of JSON object as a nodes tree allows implement an operations such as path query and transformations (like XPATH and XSLT for XML). -
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TimeSlotTracker
Simple and useful time tracker
Simple and useful time tracker. Collects tasks and works (timeslots) in hierarchical tree. Has: reports (based on xslt templates), localization (7 langs), xml data format, ical, jnlp and JIRA (R) support. Runs on Windows, Mac and Linux. The code at GitHub: https://github.com/TimeSlotTracker/timeslottracker-desktop The git on Source forge is read only (replica). -
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Java generic API for search algorithms on graphs implicitly given by tree node expansion operator
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Seshat Naming and Balancing Service
Extended COS Naming and Balancing Service
The Seshat Extended Naming and Balancing Service supplies a fully conformant COS Naming Service with extensions allowing you to store any serialized object in the naming tree. The Service also supplies a Balancer for session balancing multiple CORBA servants of the same type in balanced groups. The balanced groups can be bound to the naming tree. If you look up a balanced group you will transparently get a reference to an object in the group. The members of a group can be delivered either using a round robin or a random algorithm. ... -
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GenealogyJ is a viewer and editor for genealogic data, suitable for hobbyist, family historian and genealogy researcher. GenJ supports the Gedcom standard, is written in Java and offers many views like family tree, table, timeline, geography and more.
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TreasureBox
Organizes and searches user-defined items and images in a MySQL DB.
...By providing a zoom and rotate features I was able to browse my books or CDs on my shelves anywhere in the house. The more I used the program the more features I wanted to add. The program is fairly generic and can be used for a variety of collections within a tree structure. Digital images are easy to take and cost very little to store. Treasure Box can help you organize your treasures and help you find them when you need them. -
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Classpy
GUI tool for investigating Java class files
...Understands class files described by JVMS9. Supports Lua 5.3 binary chunk format. Supports Wasm binary format. Supports Bitcoin raw block and transaction format. Displays parsed binary file as tree and hex text. The corresponding hex text is highlighted when you select a tree node. This tool is mainly inspired by javap and JavaClassViewer. -
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ObjectBuilder2
C++ CASE tool, full life cycle code generator
...It lets you create, manipulate and navigate classes, class relations, class members and class methods at a high level of abstraction. ObjectBuilder dramatically simplify work with C++ project architecture. I use it and think that tree OO interface targeted to C++ more fast and power than UML class diagrams. ObjectBuilder perfectly organize C++ header files with any level of complexity. Even if you use loop-references if OO hierarchy, you need include only one project-level header file. You can easy modify and refactore existing project with cut/copy/paste ANY object (from Method Argument to entire Project) within project and between ObjectBuilder projects. ... -
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TreeForm Syntax Tree Drawing Software
Syntax Tree Drawing Software (Linguistics)
TreeForm Syntax tree drawing software is a Linguistic Syntax/Semantics tree drawing editor. Designed for graphical n-ary tree drawing. Mac users can install the software through the new package, but must give authority through "System Preferences" > "Security & Privacy". Windows and Linux users can run the software through the JAR file directly. All users must have Java 8 or higher installed. https://java.com/en/download/
