For the installation instructions please see Wiki page: https://sourceforge.net/p/tuit/wiki/

IMPORTANT: since version 1.0.4.0 TUIT allows to select RDP-like formatted output to improve
out of the box compatability with tools, that assume RDP-formatted input.
A new field has been added to the properties.xml, please make sure to update it to contain
<OutputFormat format="tuit"/> or <OutputFormat format="rdp"/> in the <BLASTNParameters> section.

Read our paper in Biotechniques: http://www.ncbi.nlm.nih.gov/pubmed/24502797

Taxonomic Unit Identification Tool (TUIT) is a free open source platform-independent software, designed specifically to facilitate taxonomic annotation of nucleotide sequences via BLAST homology search against the NCBI databases. TUIT is immediately applicable for both to 16S microboime studies as well as for taxonomic classification of the nucleotide reads. Please see the project's Wiki page.

Project Activity

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Categories

Bio-Informatics

License

GNU General Public License version 3.0 (GPLv3)

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TUIT Web Site

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Additional Project Details

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Java

Database Environment

JDBC, SQL-based

Related Categories

Java Bio-Informatics Software

Registered

2013-09-08
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