sassie

Use SASSIE to generate and manipulate large numbers of molecular structures and then calculate the SAXS, SANS, and neutron reflectivity profiles from atomistic structures. Use for intrinsically disordered proteins. We need alpha-testers and developers.

Features

Monte Carlo configuration sampling of proteins
Modules to study intrinsically disordered proteins
Comparison of synthetic SAXS, SANS, EM, and neutron reflectivity to data
smol library for manipulation of structures
Incorporation of NMR & fluorescence constraints
Utilities to perform MD simulations using NAMD and CHARMM
Expandable framework for additional molecular problems and experiments
Expandable framework to study non-biological polymeric systems
Utilities to study disordered proteins at membrane surfaces

Project Samples

Example phi versus psi plot of sampled dihedral angles

Iso-density plot of entire ensemble and best fit structures

Project Activity

See All Activity >

License

GNU General Public License version 2.0 (GPLv2), Other License

Follow sassie

sassie Web Site

Other Useful Business Software

Keep company data safe with Chrome Enterprise

Protect your business with AI policies and data loss prevention in the browser

Make AI work your way with Chrome Enterprise. Block unapproved sites and set custom data controls that align with your company's policies.

Download Chrome

Rate This Project

User Reviews

Be the first to post a review of sassie!

Additional Project Details

Operating Systems

Linux, Mac, Windows

Languages

English

Intended Audience

Science/Research

User Interface

Cocoa (MacOS X), Tk

Programming Language

C++, Objective-C 2.0, Python

Related Categories

Python Molecular Science Software, Python Simulation Software, Python Chemistry Software, C++ Molecular Science Software, C++ Simulation Software, C++ Chemistry Software, Objective-C 2.0 Molecular Science Software, Objective-C 2.0 Simulation Software, Objective-C 2.0 Chemistry Software

Registered

2009-12-10

Similar Business Software

Altium Develop

Altium Develop is a multidisciplinary product creation platform that breaks down silos and empowers teams to design collaboratively without limits. Built on Altium Designer and Altium 365, it unifies electrical, mechanical, software, sourcing, and manufacturing teams in a shared environment....

See Software
ActCAD Software

ActCAD is a native dwg/dxf cad software suitable for professional 2D drafting and 3D modeling projects. ActCAD is trusted by over 30000 users in over 103 countries for more than 10 years. The interface, commands, icons, dialogs, shortcuts etc. are very much similar to other popular cad software...

See Software
Evocon

Trusted by manufacturers worldwide, Evocon is a simple and easy-to-use OEE software that helps manufacturing companies improve their production efficiency and reduce waste. The system enables automated data collection, real-time data visualization, downtime tracking, bottleneck identification,...

See Software
Dronedesk

Are you wasting hours on drone flight planning? Still using spreadsheets, doc templates, and paper checklists? If so, it's time to switch to Dronedesk, the web-based drone operations management application that makes planning safe drone flights super-efficient. Dronedesk does all the...

See Software
Houzz Pro

Houzz Pro is the #1 construction management solution for residential contractors and designers. Get an all-in-one solution that spans the full customer lifecycle, including marketing, CRM, estimates, takeoffs, 3D floor plans, project management, selections, online invoicing & payments,...

See Software
AvPro Software

AvPro Software is comprehensive and easy-to-use. It's perfect for Aircraft MRO, Certified Repair Station (CRS), Aircraft Operators, and parts brokers. You can track Aircraft Parts I(nventory, Work Orders, and much more. Modular in nature and specifically designed for aircraft maintenance...

See Software