Best Reciprocal Hit from BLAST alignment download

Windows command line utility calculating protein orthologs using best reciprocal hit from BLAST alignment output

Features

-d specifies directory with BLAST outputs. All files will be used as input for the ParseBLAST.exe
-s Similarity cutoff (0.3 is recommended)
-b Y/N specifies how to calculate orthologs. Y - for best reciprocal hit; N - for all possible homologs above similarity cutoff

Project Activity

See All Activity >

License

Academic Free License (AFL)

Follow Best Reciprocal Hit from BLAST alignment

Best Reciprocal Hit from BLAST alignment Web Site

Other Useful Business Software

MongoDB Atlas runs apps anywhere

Deploy in 115+ regions with the modern database for every enterprise.

MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.

Start Free

Rate This Project

User Reviews

Be the first to post a review of Best Reciprocal Hit from BLAST alignment!

Additional Project Details

Operating Systems

Windows

Intended Audience

Science/Research

User Interface

Win32 (MS Windows)

Programming Language

C++

Related Categories

C++ Molecular Science Software

Registered

2010-12-17

Similar Business Software

Lockbox LIMS

A sample tracking, test result capture, and inventory management cloud LIMS for life science research, biotech/NGS, and industrial QC labs. Includes regulatory support for CLIA, HIPAA, Part 11, and ISO 17025. Nothing is more critical to a lab’s success than the quality, security, and...

See Software
QBench

The modern, flexible, easy-to-use LIMS. QBench enables our customers to get a LIMS up and running faster. Automate your entire lab with our developer-friendly API, Inventory Management, Customer Portal, Billing, and Quality Management System modules. QBench is a cloud-based Laboratory...

See Software
SAP S/4HANA Cloud Public Edition

SAP Cloud ERP is the premier ERP solution for growth-focused organizations. Seamlessly integrating AI, and predictive analytics, it empowers businesses to digitally transform and streamline processes end to end. Leveraging built-in industry best practices, SAP Cloud ERP accelerates...

See Software
Qualio

Qualio is the leading quality and compliance platform built exclusively for emerging life sciences companies. MedTech, pharma, biotech, and diagnostics teams use Qualio to standardize quality processes, connect them to regulatory obligations, and gain real-time visibility into compliance...

See Software
RegDesk

RegDesk is a Regulatory Information Management System (RIMS) that helps medical device companies manage global regulatory submissions, product registrations, and compliance in one centralized platform. It streamlines regulatory workflows, organizes regulatory data, and provides global regulatory...

See Software
Calira

Calira is an equipment booking and management platform for shared R&D lab equipment. It replaces the shared spreadsheets, Outlook calendars, paper signup sheets, and other improvised systems that most labs use to manage access to shared instruments. Labs use Calira to track instrument...

See Software