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Onco-STS

A web-based Laboratory Information Management System

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Description

Onco-STS is a web-based Laboratory Information Management System for sample and analysis tracking in oncogenomic experiments.
The systematic sequencing and analysis of tumour samples, as well other oncogenomic experiments, necessitates the tracking of relevant sample information throughout the investigative process. These meta-data of the sequencing and analysis procedures include information about the samples and projects as well as the sequencing centers, platforms, data locations, results locations, alignments, analysis specifications and further information relevant to the experiments.
The sample tracking system for oncogenomic studies (Onco-STS) is designed to store these data and make them easily accessible to the researchers who work with the samples. The system is a web application, which includes a database and a front-end web page that allows the remote access, submission and updating of the sample data in the database.

Onco-STS Web Site

Features

  • track projects
  • track samples
  • different user authorities
  • records for whole genome, whole exome and RNA seuqensing, SNParrays, aCGH
  • nucleic acid extraxtions
  • track sequencing prosedures, results, data, libraries, alignment and analisis methods

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Additional Project Details

Intended Audience

Science/Research

User Interface

Web-based

Programming Language

Groovy, Java

Registered

2013-04-25

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