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From: <al...@us...> - 2009-09-25 20:53:55
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Revision: 2086
http://obi.svn.sourceforge.net/obi/?rev=2086&view=rev
Author: alanr
Date: 2009-09-25 20:53:35 +0000 (Fri, 25 Sep 2009)
Log Message:
-----------
p4 bug. xml base confused as ontology uri. change to match.
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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From: <al...@us...> - 2009-09-25 20:46:56
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Revision: 2085
http://obi.svn.sourceforge.net/obi/?rev=2085&view=rev
Author: alanr
Date: 2009-09-25 20:46:43 +0000 (Fri, 25 Sep 2009)
Log Message:
-----------
how did the obi URL get to be obofoundry vs obolibrary? fixed.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-24 16:14:31
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Revision: 2084
http://obi.svn.sourceforge.net/obi/?rev=2084&view=rev
Author: parkinso
Date: 2009-09-24 16:14:22 +0000 (Thu, 24 Sep 2009)
Log Message:
-----------
modified for clin trials use case
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-24 16:13:52
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Revision: 2083
http://obi.svn.sourceforge.net/obi/?rev=2083&view=rev
Author: parkinso
Date: 2009-09-24 16:13:46 +0000 (Thu, 24 Sep 2009)
Log Message:
-----------
added negative reference substance role and drug role instances inhere in fucoidan and guar gum instances
Modified Paths:
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trunk/src/ontology/branches/investigation-use-case.owl
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From: <par...@us...> - 2009-09-24 15:54:57
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Revision: 2082
http://obi.svn.sourceforge.net/obi/?rev=2082&view=rev
Author: parkinso
Date: 2009-09-24 15:54:43 +0000 (Thu, 24 Sep 2009)
Log Message:
-----------
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-24 15:54:03
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Revision: 2081
http://obi.svn.sourceforge.net/obi/?rev=2081&view=rev
Author: parkinso
Date: 2009-09-24 15:53:52 +0000 (Thu, 24 Sep 2009)
Log Message:
-----------
Modified Paths:
--------------
trunk/src/ontology/branches/investigation-use-case.owl
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From: <par...@us...> - 2009-09-23 20:02:19
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Revision: 2080
http://obi.svn.sourceforge.net/obi/?rev=2080&view=rev
Author: parkinso
Date: 2009-09-23 20:02:12 +0000 (Wed, 23 Sep 2009)
Log Message:
-----------
guar gum, fucoidan, antithrombin III added
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-23 20:01:43
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Revision: 2079
http://obi.svn.sourceforge.net/obi/?rev=2079&view=rev
Author: parkinso
Date: 2009-09-23 20:01:31 +0000 (Wed, 23 Sep 2009)
Log Message:
-----------
2x homo sapiens instances, guar gum, fucoidan, and polystyrene tube added
Modified Paths:
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trunk/src/ontology/branches/investigation-use-case.owl
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From: <par...@us...> - 2009-09-23 12:55:14
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Revision: 2078
http://obi.svn.sourceforge.net/obi/?rev=2078&view=rev
Author: parkinso
Date: 2009-09-23 12:55:05 +0000 (Wed, 23 Sep 2009)
Log Message:
-----------
Glucose assay figure from JF for OBI paper
Added Paths:
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trunk/docs/papers/release/Figures/FostelJ09_4943 schematic v01.ppt
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From: <mco...@us...> - 2009-09-17 21:43:52
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Revision: 2077
http://obi.svn.sourceforge.net/obi/?rev=2077&view=rev
Author: mcourtot
Date: 2009-09-17 21:43:41 +0000 (Thu, 17 Sep 2009)
Log Message:
-----------
added xmlns, corrected xml:base and added ontology URI
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <mco...@us...> - 2009-09-15 22:22:25
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Revision: 2074
http://obi.svn.sourceforge.net/obi/?rev=2074&view=rev
Author: mcourtot
Date: 2009-09-15 21:32:03 +0000 (Tue, 15 Sep 2009)
Log Message:
-----------
updated to reflect change from OBI_0000283 imported from to IAO_0000412
Modified Paths:
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trunk/src/tools/build/create-external-derived.lisp
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From: <mco...@us...> - 2009-09-15 21:45:53
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Revision: 2076
http://obi.svn.sourceforge.net/obi/?rev=2076&view=rev
Author: mcourtot
Date: 2009-09-15 21:45:43 +0000 (Tue, 15 Sep 2009)
Log Message:
-----------
restored some missing labels
Modified Paths:
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trunk/src/ontology/branches/externalDerived.owl
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From: <al...@us...> - 2009-09-15 21:37:30
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Revision: 2075
http://obi.svn.sourceforge.net/obi/?rev=2075&view=rev
Author: alanr
Date: 2009-09-15 21:37:24 +0000 (Tue, 15 Sep 2009)
Log Message:
-----------
'imported from' move from OBI to IAO -> IAO_0000412 is born. OBI_0000283 is obsoleted
Modified Paths:
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trunk/src/ontology/branches/external-byhand.owl
trunk/src/ontology/branches/external.owl
trunk/src/ontology/branches/externalDerived.owl
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From: <al...@us...> - 2009-09-15 21:17:36
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Revision: 2073
http://obi.svn.sourceforge.net/obi/?rev=2073&view=rev
Author: alanr
Date: 2009-09-15 21:17:29 +0000 (Tue, 15 Sep 2009)
Log Message:
-----------
OBI_0000283 -> IAO_0000412
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-15 13:24:24
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Revision: 2072
http://obi.svn.sourceforge.net/obi/?rev=2072&view=rev
Author: parkinso
Date: 2009-09-15 13:23:51 +0000 (Tue, 15 Sep 2009)
Log Message:
-----------
edited drug definition to conform to FG's proposal
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <jam...@us...> - 2009-09-15 08:25:35
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Revision: 2071
http://obi.svn.sourceforge.net/obi/?rev=2071&view=rev
Author: jamesmalone
Date: 2009-09-15 08:25:25 +0000 (Tue, 15 Sep 2009)
Log Message:
-----------
changes to slide reflecting call 14th Sep 09
Modified Paths:
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trunk/docs/papers/release/Figures/Clinical usecase.ppt
trunk/docs/papers/release/Figures/Clinical usecase9-10b.ppt
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From: <par...@us...> - 2009-09-14 19:14:14
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Revision: 2070
http://obi.svn.sourceforge.net/obi/?rev=2070&view=rev
Author: parkinso
Date: 2009-09-14 19:14:08 +0000 (Mon, 14 Sep 2009)
Log Message:
-----------
1. edited drug role def. to make it more general
2. re-pointed obsolete class role of potential study participant to study subject
3. study participant role deprecated
4. excluded study participant role deprecated
5. study population role deprecated, child terms asserted under role
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-14 10:39:10
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Revision: 2069
http://obi.svn.sourceforge.net/obi/?rev=2069&view=rev
Author: parkinso
Date: 2009-09-14 10:39:04 +0000 (Mon, 14 Sep 2009)
Log Message:
-----------
Added enrollment back in after email discussion, fixed some role usage.
Modified Paths:
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trunk/docs/papers/release/Figures/Clinical usecase9-10b.ppt
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From: <par...@us...> - 2009-09-14 10:04:15
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Revision: 2068
http://obi.svn.sourceforge.net/obi/?rev=2068&view=rev
Author: parkinso
Date: 2009-09-14 10:04:05 +0000 (Mon, 14 Sep 2009)
Log Message:
-----------
Obsoleted role of potential study participant based on email discussion. Existing child classes moved to _under discussion.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <lso...@us...> - 2009-09-12 12:06:46
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Revision: 2067
http://obi.svn.sourceforge.net/obi/?rev=2067&view=rev
Author: lsoldatova
Date: 2009-09-12 12:06:33 +0000 (Sat, 12 Sep 2009)
Log Message:
-----------
after review by Larisa Soldatova
Added Paths:
-----------
trunk/docs/papers/release/Release-Manuscript-Master-lss.doc
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From: <jen...@us...> - 2009-09-10 19:30:49
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Revision: 2066
http://obi.svn.sourceforge.net/obi/?rev=2066&view=rev
Author: jenfostel
Date: 2009-09-10 19:30:37 +0000 (Thu, 10 Sep 2009)
Log Message:
-----------
added new version of the clinical use case
Added Paths:
-----------
trunk/docs/papers/release/Figures/Clinical usecase9-10b.ppt
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From: <par...@us...> - 2009-09-09 22:13:19
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Revision: 2065
http://obi.svn.sourceforge.net/obi/?rev=2065&view=rev
Author: parkinso
Date: 2009-09-09 22:13:11 +0000 (Wed, 09 Sep 2009)
Log Message:
-----------
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-09-09 16:35:33
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Revision: 2064
http://obi.svn.sourceforge.net/obi/?rev=2064&view=rev
Author: bjoernpeters
Date: 2009-09-09 16:35:18 +0000 (Wed, 09 Sep 2009)
Log Message:
-----------
Added instances to model Fucoidan use case (JF)
Modified Paths:
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trunk/src/ontology/branches/investigation-use-case.owl
trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-09-08 14:50:46
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Revision: 2063
http://obi.svn.sourceforge.net/obi/?rev=2063&view=rev
Author: bjoernpeters
Date: 2009-09-08 14:50:38 +0000 (Tue, 08 Sep 2009)
Log Message:
-----------
fixed 'occurence of disease' which was still using the duplicate 'disease' term I obsoleted previously
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-09-08 00:26:53
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Revision: 2062
http://obi.svn.sourceforge.net/obi/?rev=2062&view=rev
Author: bjoernpeters
Date: 2009-09-07 23:36:53 +0000 (Mon, 07 Sep 2009)
Log Message:
-----------
moved all PCR related terms under 'enzymatic amplification'. will need further cleanup, as some children are redundant.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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