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From: <al...@us...> - 2008-04-08 20:12:58
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Revision: 535
http://obi.svn.sourceforge.net/obi/?rev=535&view=rev
Author: alanr
Date: 2008-04-08 13:12:47 -0700 (Tue, 08 Apr 2008)
Log Message:
-----------
based on latest release
Added Paths:
-----------
trunk/docs/user/obi-lsw-report.html
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From: <mco...@us...> - 2008-04-08 19:13:25
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Revision: 534
http://obi.svn.sourceforge.net/obi/?rev=534&view=rev
Author: mcourtot
Date: 2008-04-08 12:13:31 -0700 (Tue, 08 Apr 2008)
Log Message:
-----------
list of new purls to be created - these are the OBI classes that have been added since last release
Added Paths:
-----------
tags/releases/2008-04-08/merged/list-purls.xml
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From: <mco...@us...> - 2008-04-08 18:58:18
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Revision: 533
http://obi.svn.sourceforge.net/obi/?rev=533&view=rev
Author: mcourtot
Date: 2008-04-08 11:58:19 -0700 (Tue, 08 Apr 2008)
Log Message:
-----------
added release notes
Added Paths:
-----------
trunk/docs/user/release_notes.txt
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From: <mco...@us...> - 2008-04-08 18:52:52
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Revision: 532
http://obi.svn.sourceforge.net/obi/?rev=532&view=rev
Author: mcourtot
Date: 2008-04-08 11:52:57 -0700 (Tue, 08 Apr 2008)
Log Message:
-----------
release number 2
Added Paths:
-----------
tags/releases/2008-04-08/
tags/releases/2008-04-08/merged/
tags/releases/2008-04-08/merged/OBI-ProtegeFriendly.owl
tags/releases/2008-04-08/merged/OBI-ProtegeFriendly.pprj
tags/releases/2008-04-08/merged/OBI.owl
tags/releases/2008-04-08/merged/md5.txt
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From: <mco...@us...> - 2008-04-08 18:42:58
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Revision: 531
http://obi.svn.sourceforge.net/obi/?rev=531&view=rev
Author: mcourtot
Date: 2008-04-08 11:42:58 -0700 (Tue, 08 Apr 2008)
Log Message:
-----------
normalized files for release
Modified Paths:
--------------
trunk/src/ontology/branches/AnnotationProperty.owl
trunk/src/ontology/branches/Biomaterial.owl
trunk/src/ontology/branches/DataFormatSpecification.owl
trunk/src/ontology/branches/DataTransformation.owl
trunk/src/ontology/branches/DigitalEntityPlus.owl
trunk/src/ontology/branches/InstrumentAndPart.owl
trunk/src/ontology/branches/OBI-Function.owl
trunk/src/ontology/branches/Obsolete.owl
trunk/src/ontology/branches/PlanAndPlannedProcess.owl
trunk/src/ontology/branches/Quality.owl
trunk/src/ontology/branches/Relations.owl
trunk/src/ontology/branches/Role.owl
trunk/src/ontology/branches/TheRest.owl
trunk/src/ontology/branches/disjoints.owl
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From: <dan...@us...> - 2008-04-08 16:45:14
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Revision: 530
http://obi.svn.sourceforge.net/obi/?rev=530&view=rev
Author: daniel_schober
Date: 2008-04-08 09:44:47 -0700 (Tue, 08 Apr 2008)
Log Message:
-----------
temperature_control_bath and subclasses, refined Metadata.
Modified Paths:
--------------
trunk/src/ontology/branches/InstrumentAndPart.owl
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From: <dan...@us...> - 2008-04-08 13:16:09
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Revision: 529
http://obi.svn.sourceforge.net/obi/?rev=529&view=rev
Author: daniel_schober
Date: 2008-04-08 06:16:05 -0700 (Tue, 08 Apr 2008)
Log Message:
-----------
renamed heating_bath to temperature_control_bath and modified definition (was:
<owl:Class rdf:about="http://purl.obofoundry.org/obo/OBI_0400120">
<OBI_0000288 xml:lang="en">heated_bath</OBI_0000288>
<OBI_0000274 xml:lang="en">Trish Wetzel</OBI_0000274>
<OBI_0000274 rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Daniel Schober</OBI_0000274>
<OBI_0000279 xml:lang="en">http://en.wikipedia.org/wiki/Heated_bath</OBI_0000279>
<OBI_0000287 xml:lang="en">VWR Signature Deep-Chamber Heated Water Bath. A water bath is used for temperatures up to 100 ?\195?\130?\194?\176C. An oil bath is employed for temperatures over 100 ?\195?\130?\194?\176C.</OBI_0000287>
<OBI_0000281 rdf:resource="http://purl.obofoundry.org/obo/OBI_0000318"/>
<OBI_0000291 xml:lang="en">A heated_bath is a device in which a fluid is placed in an open (metal) container and is heated to allow a chemical reaction or biological process to occur at a defined temperature. The fluid can be water for lower temperature ranges and oil for higher temperature ranges.</OBI_0000291>
<OBI_0000274 xml:lang="en">Melanie Courtot</OBI_0000274>
<rdfs:subClassOf rdf:resource="http://purl.obofoundry.org/obo/OBI_0400002"/>
<rdfs:label xml:lang="en">heated_bath</rdfs:label>
</owl:Class>
)
Modified Paths:
--------------
trunk/src/ontology/branches/InstrumentAndPart.owl
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From: <dan...@us...> - 2008-04-08 10:02:27
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Revision: 528
http://obi.svn.sourceforge.net/obi/?rev=528&view=rev
Author: daniel_schober
Date: 2008-04-08 03:02:33 -0700 (Tue, 08 Apr 2008)
Log Message:
-----------
updated definitions for 'power supply' and refined 'heating bath' incl. its definitions and added 2 subclasses plus metadata
Modified Paths:
--------------
trunk/src/ontology/branches/InstrumentAndPart.owl
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From: <al...@us...> - 2008-04-08 04:00:06
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Revision: 527
http://obi.svn.sourceforge.net/obi/?rev=527&view=rev
Author: alanr
Date: 2008-04-07 21:00:11 -0700 (Mon, 07 Apr 2008)
Log Message:
-----------
only bit of lsw that can't be brought in from external, atm
Added Paths:
-----------
trunk/lib/external/lsw/abcl
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From: <al...@us...> - 2008-04-08 03:55:50
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Revision: 526
http://obi.svn.sourceforge.net/obi/?rev=526&view=rev
Author: alanr
Date: 2008-04-07 20:55:51 -0700 (Mon, 07 Apr 2008)
Log Message:
-----------
add lsw via svn:externals
Added Paths:
-----------
trunk/lib/external/
trunk/lib/external/lsw/
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From: <al...@us...> - 2008-04-08 02:36:25
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Revision: 525
http://obi.svn.sourceforge.net/obi/?rev=525&view=rev
Author: alanr
Date: 2008-04-07 18:24:31 -0700 (Mon, 07 Apr 2008)
Log Message:
-----------
new qc query (asserted-subclass-of-defined-class kb)
Modified Paths:
--------------
trunk/src/tools/build/qc-queries.lisp
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From: <al...@us...> - 2008-04-08 01:11:51
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Revision: 524
http://obi.svn.sourceforge.net/obi/?rev=524&view=rev
Author: alanr
Date: 2008-04-07 18:11:38 -0700 (Mon, 07 Apr 2008)
Log Message:
-----------
new qc query (extra-curation-status-instances kb)
Modified Paths:
--------------
trunk/src/tools/build/qc-queries.lisp
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From: <mco...@us...> - 2008-04-07 21:49:15
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Revision: 523
http://obi.svn.sourceforge.net/obi/?rev=523&view=rev
Author: mcourtot
Date: 2008-04-07 14:49:17 -0700 (Mon, 07 Apr 2008)
Log Message:
-----------
added jar file
Added Paths:
-----------
trunk/src/tools/build/OBITools/OBITools.jar
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From: <mco...@us...> - 2008-04-07 21:45:11
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Revision: 522
http://obi.svn.sourceforge.net/obi/?rev=522&view=rev
Author: mcourtot
Date: 2008-04-07 14:45:16 -0700 (Mon, 07 Apr 2008)
Log Message:
-----------
corrected extra instance of curation status
Modified Paths:
--------------
trunk/src/ontology/branches/Role.owl
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From: <al...@us...> - 2008-04-07 14:52:30
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Revision: 521
http://obi.svn.sourceforge.net/obi/?rev=521&view=rev
Author: alanr
Date: 2008-04-07 07:52:36 -0700 (Mon, 07 Apr 2008)
Log Message:
-----------
more svn cleanup
Removed Paths:
-------------
trunk/bin/xl2owl/
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From: <al...@us...> - 2008-04-07 14:51:32
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Revision: 520
http://obi.svn.sourceforge.net/obi/?rev=520&view=rev
Author: alanr
Date: 2008-04-07 07:51:39 -0700 (Mon, 07 Apr 2008)
Log Message:
-----------
fix good catch by Daniel
Added Paths:
-----------
trunk/bin/linux/
trunk/bin/osx/
trunk/bin/windows/
Removed Paths:
-------------
trunk/bin/xl2owl/binaries/linux/
trunk/bin/xl2owl/binaries/osx/
trunk/bin/xl2owl/binaries/windows/
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From: <al...@us...> - 2008-04-07 05:46:48
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Revision: 519
http://obi.svn.sourceforge.net/obi/?rev=519&view=rev
Author: alanr
Date: 2008-04-06 22:46:54 -0700 (Sun, 06 Apr 2008)
Log Message:
-----------
blah blah
Added Paths:
-----------
trunk/docs/developer/instructions-svn-local.txt
Removed Paths:
-------------
trunk/src/ontology/instructions-svn-local.txt
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From: <al...@us...> - 2008-04-07 05:45:42
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Revision: 518
http://obi.svn.sourceforge.net/obi/?rev=518&view=rev
Author: alanr
Date: 2008-04-06 22:45:48 -0700 (Sun, 06 Apr 2008)
Log Message:
-----------
couple of unchecked in exampels
Added Paths:
-----------
trunk/src/examples/development/object-top-level/NoCollectiveConstitutes2-butchered.owl
trunk/src/examples/development/object-top-level/Object.lisp
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From: <al...@us...> - 2008-04-07 05:43:23
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Revision: 517
http://obi.svn.sourceforge.net/obi/?rev=517&view=rev
Author: alanr
Date: 2008-04-06 22:43:29 -0700 (Sun, 06 Apr 2008)
Log Message:
-----------
continue svn reorg - tools
Added Paths:
-----------
trunk/docs/developer/loading-obi-into-neurocommons.txt
trunk/src/tools/build/
trunk/src/tools/build/OBIReleaseClient.java
trunk/src/tools/build/OBITools/
trunk/src/tools/build/OBIreleaseCheck.sh
trunk/src/tools/build/add-disjoints.lisp
trunk/src/tools/build/gather-class-uris.pl
trunk/src/tools/build/get-svn-revision.sh
trunk/src/tools/build/join-branches.pl
trunk/src/tools/build/make-all-in-one.pl
trunk/src/tools/build/modify-uris.pl
trunk/src/tools/build/new-purls.lisp
trunk/src/tools/build/normalize-namespaces.pl
trunk/src/tools/build/obi.asd
trunk/src/tools/build/qc-queries.lisp
trunk/src/tools/build/uri-report.lisp
trunk/src/tools/build/write-purls.lisp
trunk/src/tools/format-converters/denrie-sheet-importer.lisp
trunk/src/tools/format-converters/sheet-importer.lisp
Removed Paths:
-------------
trunk/src/tools/OBIReleaseClient.java
trunk/src/tools/OBITools/
trunk/src/tools/OBIreleaseCheck.sh
trunk/src/tools/add-disjoints.lisp
trunk/src/tools/denrie-sheet-importer.lisp
trunk/src/tools/gather-class-uris.pl
trunk/src/tools/get-svn-revision.sh
trunk/src/tools/join-branches.pl
trunk/src/tools/loading-obi-into-neurocommons.txt
trunk/src/tools/make-all-in-one.pl
trunk/src/tools/modify-uris.pl
trunk/src/tools/new-purls.lisp
trunk/src/tools/normalize-namespaces.pl
trunk/src/tools/obi.asd
trunk/src/tools/qc-queries.lisp
trunk/src/tools/sheet-importer.lisp
trunk/src/tools/uri-report.lisp
trunk/src/tools/write-purls.lisp
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From: <al...@us...> - 2008-04-07 05:37:01
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Revision: 516
http://obi.svn.sourceforge.net/obi/?rev=516&view=rev
Author: alanr
Date: 2008-04-06 22:37:07 -0700 (Sun, 06 Apr 2008)
Log Message:
-----------
add doc subdirs
Added Paths:
-----------
trunk/docs/developer/
trunk/docs/user/
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From: <al...@us...> - 2008-04-07 05:36:05
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Revision: 515
http://obi.svn.sourceforge.net/obi/?rev=515&view=rev
Author: alanr
Date: 2008-04-06 22:36:12 -0700 (Sun, 06 Apr 2008)
Log Message:
-----------
add new trunk top levels
Added Paths:
-----------
trunk/docs/
trunk/lib/
trunk/tests/
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From: <al...@us...> - 2008-04-07 05:24:19
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Revision: 514
http://obi.svn.sourceforge.net/obi/?rev=514&view=rev
Author: alanr
Date: 2008-04-06 22:24:26 -0700 (Sun, 06 Apr 2008)
Log Message:
-----------
continuing svn reorg
Modified Paths:
--------------
trunk/src/ontology/branches/obi-lsw.owl.template
trunk/src/ontology/branches/obi.repository.template
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From: <al...@us...> - 2008-04-07 05:17:42
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Revision: 513
http://obi.svn.sourceforge.net/obi/?rev=513&view=rev
Author: alanr
Date: 2008-04-06 22:17:48 -0700 (Sun, 06 Apr 2008)
Log Message:
-----------
continuing svn reorg
Removed Paths:
-------------
ontology/
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From: <al...@us...> - 2008-04-07 05:17:25
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Revision: 512
http://obi.svn.sourceforge.net/obi/?rev=512&view=rev
Author: alanr
Date: 2008-04-06 22:17:26 -0700 (Sun, 06 Apr 2008)
Log Message:
-----------
continuing svn reorg
Added Paths:
-----------
trunk/obsolete/branches-lastac_autoID/
trunk/obsolete/branches-lastac_autoID/default.properties.InstrumentAndPart
trunk/obsolete/branches-lastac_autoID/default.properties.biomaterial
trunk/obsolete/branches-lastac_autoID/default.properties.datatransformation
trunk/src/ontology/instructions-svn-local.txt
Removed Paths:
-------------
branchDevelopment/
trunk/obsolete/branches-lastac_autoID/default.properties.InstrumentAndPart
trunk/obsolete/branches-lastac_autoID/default.properties.biomaterial
trunk/obsolete/branches-lastac_autoID/default.properties.datatransformation
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From: <al...@us...> - 2008-04-07 05:09:23
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Revision: 511
http://obi.svn.sourceforge.net/obi/?rev=511&view=rev
Author: alanr
Date: 2008-04-06 22:09:28 -0700 (Sun, 06 Apr 2008)
Log Message:
-----------
continue svn reorg
Added Paths:
-----------
trunk/src/ontology/branches/
trunk/src/ontology/branches/AnnotationProperty.owl
trunk/src/ontology/branches/Biomaterial.owl
trunk/src/ontology/branches/DataFormatSpecification.owl
trunk/src/ontology/branches/DataTransformation.owl
trunk/src/ontology/branches/DigitalEntityPlus.owl
trunk/src/ontology/branches/InstrumentAndPart.owl
trunk/src/ontology/branches/OBI-Function.owl
trunk/src/ontology/branches/Obsolete.owl
trunk/src/ontology/branches/PlanAndPlannedProcess.owl
trunk/src/ontology/branches/Quality.owl
trunk/src/ontology/branches/Relations.owl
trunk/src/ontology/branches/Role.owl
trunk/src/ontology/branches/TheRest.owl
trunk/src/ontology/branches/disjoints.owl
trunk/src/ontology/branches/external.owl
trunk/src/ontology/branches/externalDerived.owl
trunk/src/ontology/branches/obi-lsw.owl.template
trunk/src/ontology/branches/obi-owl-full.owl
trunk/src/ontology/branches/obi.owl.template
trunk/src/ontology/branches/obi.pprj.template
trunk/src/ontology/branches/obi.repository.template
Removed Paths:
-------------
branchDevelopment/trunk/AnnotationProperty.owl
branchDevelopment/trunk/Biomaterial.owl
branchDevelopment/trunk/DataFormatSpecification.owl
branchDevelopment/trunk/DataTransformation.owl
branchDevelopment/trunk/DigitalEntityPlus.owl
branchDevelopment/trunk/InstrumentAndPart.owl
branchDevelopment/trunk/OBI-Function.owl
branchDevelopment/trunk/Obsolete.owl
branchDevelopment/trunk/PlanAndPlannedProcess.owl
branchDevelopment/trunk/Quality.owl
branchDevelopment/trunk/Relations.owl
branchDevelopment/trunk/Role.owl
branchDevelopment/trunk/TheRest.owl
branchDevelopment/trunk/disjoints.owl
branchDevelopment/trunk/external.owl
branchDevelopment/trunk/externalDerived.owl
branchDevelopment/trunk/obi-lsw.owl.template
branchDevelopment/trunk/obi-owl-full.owl
branchDevelopment/trunk/obi.owl.template
branchDevelopment/trunk/obi.pprj.template
branchDevelopment/trunk/obi.repository.template
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