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From: <al...@us...> - 2008-04-03 12:41:55
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Revision: 485
http://obi.svn.sourceforge.net/obi/?rev=485&view=rev
Author: alanr
Date: 2008-04-03 05:41:58 -0700 (Thu, 03 Apr 2008)
Log Message:
-----------
Factor out instances of data format specification into file DataFormatSpecification.owl. Update your .repository and .owl files to add it
Modified Paths:
--------------
branchDevelopment/trunk/DigitalEntityPlus.owl
branchDevelopment/trunk/obi.owl.template
branchDevelopment/trunk/obi.repository.template
branchDevelopment/trunk/obi.repository.template.pc
Added Paths:
-----------
branchDevelopment/trunk/DataFormatSpecification.owl
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From: <mco...@us...> - 2008-04-03 00:54:16
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Revision: 484
http://obi.svn.sourceforge.net/obi/?rev=484&view=rev
Author: mcourtot
Date: 2008-04-02 17:54:22 -0700 (Wed, 02 Apr 2008)
Log Message:
-----------
removed printout which was messing up with shell script results
Modified Paths:
--------------
branchDevelopment/trunk/sourcecodes/OBITools/src/ca/bccrc/obi/OBIMerger.java
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From: <mco...@us...> - 2008-04-02 23:01:06
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Revision: 483
http://obi.svn.sourceforge.net/obi/?rev=483&view=rev
Author: mcourtot
Date: 2008-04-02 16:01:12 -0700 (Wed, 02 Apr 2008)
Log Message:
-----------
restored labels of pool of specimens and chromium 51
Modified Paths:
--------------
branchDevelopment/trunk/Biomaterial.owl
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From: <mco...@us...> - 2008-04-02 22:47:49
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Revision: 482
http://obi.svn.sourceforge.net/obi/?rev=482&view=rev
Author: mcourtot
Date: 2008-04-02 15:47:55 -0700 (Wed, 02 Apr 2008)
Log Message:
-----------
creates the list of new purls and writes them to a file
Added Paths:
-----------
branchDevelopment/trunk/sourcecodes/write-purls.lisp
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From: <al...@us...> - 2008-04-02 16:31:53
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Revision: 481
http://obi.svn.sourceforge.net/obi/?rev=481&view=rev
Author: alanr
Date: 2008-04-02 09:31:47 -0700 (Wed, 02 Apr 2008)
Log Message:
-----------
add melanie as purl admin on these
Modified Paths:
--------------
branchDevelopment/trunk/sourcecodes/new-purls.lisp
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From: <al...@us...> - 2008-04-02 16:17:54
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Revision: 480
http://obi.svn.sourceforge.net/obi/?rev=480&view=rev
Author: alanr
Date: 2008-04-02 09:17:58 -0700 (Wed, 02 Apr 2008)
Log Message:
-----------
fix bug - was comparing kb to kb
Modified Paths:
--------------
branchDevelopment/trunk/sourcecodes/new-purls.lisp
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From: <jam...@us...> - 2008-04-02 16:13:22
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Revision: 479
http://obi.svn.sourceforge.net/obi/?rev=479&view=rev
Author: jamesmalone
Date: 2008-04-02 09:13:28 -0700 (Wed, 02 Apr 2008)
Log Message:
-----------
Update from Elisabetta for Aristotelian form definitions
Modified Paths:
--------------
branchDevelopment/trunk/DataTransformation.owl
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From: <mco...@us...> - 2008-04-01 21:24:39
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Revision: 478
http://obi.svn.sourceforge.net/obi/?rev=478&view=rev
Author: mcourtot
Date: 2008-04-01 14:24:45 -0700 (Tue, 01 Apr 2008)
Log Message:
-----------
updated list of disjoints
Modified Paths:
--------------
branchDevelopment/trunk/disjoints.owl
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From: <mco...@us...> - 2008-04-01 19:57:40
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Revision: 477
http://obi.svn.sourceforge.net/obi/?rev=477&view=rev
Author: mcourtot
Date: 2008-04-01 12:57:02 -0700 (Tue, 01 Apr 2008)
Log Message:
-----------
corrected curation status of labware from string to instance
Modified Paths:
--------------
branchDevelopment/trunk/Obsolete.owl
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From: <mco...@us...> - 2008-04-01 19:54:16
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Revision: 476
http://obi.svn.sourceforge.net/obi/?rev=476&view=rev
Author: mcourtot
Date: 2008-04-01 12:52:43 -0700 (Tue, 01 Apr 2008)
Log Message:
-----------
removed old duplicated curation status of collection which was a string and not an instance
Modified Paths:
--------------
branchDevelopment/trunk/Biomaterial.owl
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From: <mco...@us...> - 2008-04-01 19:44:27
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Revision: 475
http://obi.svn.sourceforge.net/obi/?rev=475&view=rev
Author: mcourtot
Date: 2008-04-01 12:43:37 -0700 (Tue, 01 Apr 2008)
Log Message:
-----------
updated curation_status of obi_function and instrument_function to instances
Modified Paths:
--------------
branchDevelopment/trunk/OBI-Function.owl
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From: <al...@us...> - 2008-04-01 18:15:06
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Revision: 474
http://obi.svn.sourceforge.net/obi/?rev=474&view=rev
Author: alanr
Date: 2008-04-01 11:15:10 -0700 (Tue, 01 Apr 2008)
Log Message:
-----------
don't show sparql for qc queries
Modified Paths:
--------------
branchDevelopment/trunk/sourcecodes/qc-queries.lisp
Property Changed:
----------------
branchDevelopment/trunk/
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From: <all...@us...> - 2008-04-01 09:26:21
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Revision: 473
http://obi.svn.sourceforge.net/obi/?rev=473&view=rev
Author: allysonlister
Date: 2008-04-01 02:26:20 -0700 (Tue, 01 Apr 2008)
Log Message:
-----------
Added note that after running your own "svn update" from within shell.sf.net, you must run a chmod command to ensure that all files are writeable by everyone in the OBI group.
Modified Paths:
--------------
web/trunk/Maintenance.txt
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From: <all...@us...> - 2008-04-01 09:20:05
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Revision: 472
http://obi.svn.sourceforge.net/obi/?rev=472&view=rev
Author: allysonlister
Date: 2008-04-01 02:19:44 -0700 (Tue, 01 Apr 2008)
Log Message:
-----------
Added link to Bjoern's faculty page
Modified Paths:
--------------
web/trunk/htdocs/consortium/index.php
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From: <mco...@us...> - 2008-03-31 16:54:13
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Revision: 471
http://obi.svn.sourceforge.net/obi/?rev=471&view=rev
Author: mcourtot
Date: 2008-03-31 09:54:15 -0700 (Mon, 31 Mar 2008)
Log Message:
-----------
removed _move_to_quality as subclass of owl Thing
Modified Paths:
--------------
branchDevelopment/trunk/Obsolete.owl
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From: <p_r...@us...> - 2008-03-31 16:11:44
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Revision: 470
http://obi.svn.sourceforge.net/obi/?rev=470&view=rev
Author: p_rocca_serra
Date: 2008-03-31 09:11:18 -0700 (Mon, 31 Mar 2008)
Log Message:
-----------
Modified Paths:
--------------
branchDevelopment/trunk/Biomaterial.owl
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From: <mco...@us...> - 2008-03-31 01:22:17
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Revision: 469
http://obi.svn.sourceforge.net/obi/?rev=469&view=rev
Author: mcourtot
Date: 2008-03-30 18:22:22 -0700 (Sun, 30 Mar 2008)
Log Message:
-----------
modified medical experiments to clinical investigations as agreed on dev call
Modified Paths:
--------------
web/trunk/htdocs/index.php
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From: <mco...@us...> - 2008-03-30 14:21:00
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Revision: 468
http://obi.svn.sourceforge.net/obi/?rev=468&view=rev
Author: mcourtot
Date: 2008-03-30 07:21:05 -0700 (Sun, 30 Mar 2008)
Log Message:
-----------
updated date field
Modified Paths:
--------------
branchDevelopment/trunk/TheRest.owl
Property Changed:
----------------
branchDevelopment/trunk/TheRest.owl
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From: <mco...@us...> - 2008-03-30 14:08:28
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Revision: 467
http://obi.svn.sourceforge.net/obi/?rev=467&view=rev
Author: mcourtot
Date: 2008-03-30 07:08:29 -0700 (Sun, 30 Mar 2008)
Log Message:
-----------
corrected wrong instance of curation_status
normalized ID of droplet_sorter
Modified Paths:
--------------
branchDevelopment/trunk/InstrumentAndPart.owl
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From: <al...@us...> - 2008-03-30 06:35:21
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Revision: 466
http://obi.svn.sourceforge.net/obi/?rev=466&view=rev
Author: alanr
Date: 2008-03-29 23:35:27 -0700 (Sat, 29 Mar 2008)
Log Message:
-----------
An imports crept in. Removed it
Modified Paths:
--------------
branchDevelopment/trunk/Relations.owl
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From: <al...@us...> - 2008-03-30 06:34:45
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Revision: 465
http://obi.svn.sourceforge.net/obi/?rev=465&view=rev
Author: alanr
Date: 2008-03-29 23:34:50 -0700 (Sat, 29 Mar 2008)
Log Message:
-----------
some cleanup. Properly map curations status entries
Modified Paths:
--------------
branchDevelopment/trunk/sourcecodes/modify-uris.pl
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From: <al...@us...> - 2008-03-30 05:29:49
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Revision: 464
http://obi.svn.sourceforge.net/obi/?rev=464&view=rev
Author: alanr
Date: 2008-03-29 22:29:55 -0700 (Sat, 29 Mar 2008)
Log Message:
-----------
remove import of protege-dc, as obi.owl does it for us when operating locally
Modified Paths:
--------------
branchDevelopment/trunk/bfo/bfo.owl
branchDevelopment/trunk/bfo/bfo11.owl
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From: <mco...@us...> - 2008-03-30 02:01:50
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Revision: 463
http://obi.svn.sourceforge.net/obi/?rev=463&view=rev
Author: mcourtot
Date: 2008-03-29 19:01:53 -0700 (Sat, 29 Mar 2008)
Log Message:
-----------
modified ro-bfo-bridge import url
Modified Paths:
--------------
branchDevelopment/trunk/sourcecodes/OBITools/src/ca/bccrc/obi/OBIMerger.java
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From: <mco...@us...> - 2008-03-28 21:32:12
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Revision: 462
http://obi.svn.sourceforge.net/obi/?rev=462&view=rev
Author: mcourtot
Date: 2008-03-28 14:31:45 -0700 (Fri, 28 Mar 2008)
Log Message:
-----------
updated to new uris purl.obofoundry.org/obo/ in maybeRewriteURI
Modified Paths:
--------------
branchDevelopment/trunk/sourcecodes/modify-uris.pl
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From: <p_r...@us...> - 2008-03-28 15:00:30
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Revision: 461
http://obi.svn.sourceforge.net/obi/?rev=461&view=rev
Author: p_rocca_serra
Date: 2008-03-28 08:00:22 -0700 (Fri, 28 Mar 2008)
Log Message:
-----------
Obsoleting helper class following dispatch to other branches
Blood serum and Blood plasma classes moved under class entity of organismal origin -> modification to definition to reflect change + addition of PMID anchored example of usage
update to Collection metadata (PMID example_of_usage), same for screening and phage display libraries
Creation of Import for Chemical entity and creation of a new class Tris to test Imported Class when adding relations (e.g. has_role buffer) which can not be imported.
Modified Paths:
--------------
branchDevelopment/trunk/Biomaterial.owl
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