Showing 14 open source projects for "evolution"

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  • 1
    GenX

    GenX

    X-Ray and Neutron Reflectivity Modeling

    GenX is a scientific program to refine x-ray refelcetivity, neutron reflectivity and surface x-ray diffraction data using the differential evolution algorithm. GenX is very modular and highly extensible and can be used as a general fitting program.
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    Downloads: 109 This Week
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  • 2
    QUCAS-PDP Astronomical Image Framework

    QUCAS-PDP Astronomical Image Framework

    After 4/15/26 this project will be archived as 9 pipelines are conso

    ... 📸 Live Demo The application is deployed on Streamlit Cloud: Live App test now: https://huggingface.co/spaces/QCAUS/QCAUS QCI AstroEntangle Refiner – FDM soliton physics & image processing Magnetar QED Explorer – Magnetar fields, dark photons & vacuum QED Primordial Photon–DarkPhoton Entanglement – Von Neumann evolution in an expanding universe QCIS (Quantum Cosmology Integration Suite) – Quantum‑corrected cosmological perturbations 🔭 Overview These four projects form a complete computational framework for quantum‑inspired astrophysics. Together they enable: Image analysis of galaxy clusters (Abell, Bullet, etc.) using Fuzzy Dark Matter (FDM) soliton overlays. ...
    Downloads: 0 This Week
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  • 3

    Fosite - advection problem solver

    numerical simulation code for solving transport equations in 1D/2D/3D

    ...The underlying numerical solution method belongs to the family of unsplit conservative finite volume TVD schemes. The method is 2nd order accurate in space and uses high order Runge-Kutta and multistep schemes for time evolution. In addition to the pure advection code several source terms have been implemented including viscous diffusion and gravitational acceleration. Fosite is written with object-oriented patterns in Fortran 2003 and follows the Structure of Arrays (SoA) layout, operating on generic field datatypes. This allows for high performance on modern architectures (SIMD). ...
    Downloads: 0 This Week
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  • 4
    C++QED

    C++QED

    A framework for simulating open quantum dynamics

    ...The basic idea is to allow users to build arbitrarily complex interacting quantum systems out of free subsystems and interactions (elements), and simulate their time evolution with a number of available time-evolution drivers. C++QEDv2 specifies a small grammar to describe composite quantum systems. Apart from providing a number of elements out of the box, there are tools which facilitate the implementation of new elements. These are being added continuously, as the need arises. The principal concept of the design of C++QEDv2 is that all information available at compile time should be processed as such, with the help of TMP. ...
    Downloads: 0 This Week
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  • 5
    powerfactory-fmu

    powerfactory-fmu

    The FMI++ PowerFactory FMU Export Utility

    ...Additional files (e.g., time series files) and start values for exported variables can be specified. Currently, two types of simulations are supported: In quasi-static steady-state simulations a power system’s evolution with respect to time is captured by a series of load flow snapshots. RMS simulations allow to calculate the time-dependent dynamics of electromechanical models, including control devices (new in version v0.6).
    Downloads: 0 This Week
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  • 6
    raxmlGUI
    ...A userfriendly graphical front-end for phylogenetic analyses using RAxML (Stamatakis, 2006). Please cite: Silvestro, Michalak (2012) - raxmlGUI: a graphical front-end for RAxML. Organisms Diversity and Evolution 12, 335-337. DOI: 10.1007/s13127-011-0056-0
    Downloads: 12 This Week
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  • 7
    D-Tailor

    D-Tailor

    D-Tailor: automated analysis and design of DNA sequences

    Recent advances in DNA cloning and synthesis technologies afford high throughput implementation of designed sequences into living cells. However, our ability to design sequences to interrogate multifactorial biological processes and further engineer biological functions is lagging behind. DNA-Tailor (D-Tailor) is a fully extendable software framework for biological sequence analysis and multi-objective sequence design. D-Tailor permits the seamless integration of an arbitrary number of...
    Downloads: 0 This Week
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  • 8
    BayesRate

    BayesRate

    Bayesian estimation of diversification rates

    ...BMC Evolutionary Biology, 11, 311 Silvestro D., Zizka G. & Schulte K. (2014) Disentangling the effects of key innovations on the diversification of Bromelioideae (Bromeliaceae). Evolution, 68, 163-175.
    Downloads: 0 This Week
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  • 9
    gtkhst is a collection of GLib2 objects to compute statistics (mean, variance, correlations) in 1 and 2 dimensions and a set of Gtk2 widgets to display 1D and 2D histograms as well as trace plots showing the evolution with time of the monitored quantity
    Downloads: 0 This Week
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  • 10
    We aim to develop a transformative computational method for automatic discovery of a set of dynamical rules that best captures both state transition and topological transformation in the data of spatio-temporal evolution of a complex network.
    Downloads: 0 This Week
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  • 11
    Evoversum
    This project has been moved to https://bitbucket.org/pbazant/evoversum/src/master/ . Evoversum is a fast Darwinian evolution simulator. The program simulates a 2D world populated with "animals" which struggle for food, reproduce and may also eat each other. The subject of evolution is their behavior, which may become quite complex. There is an updated video tutorial at http://www.youtube.com/watch?v=nPkZvyVDWJU !
    Downloads: 0 This Week
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  • 12
    Ouroborus is an artificial life framework for mobile agents on a background of cellular automata. It can be used to teach and research topics such as population genetics, ecology and evolution. The demo includes a curses view and live Csound audio.
    Downloads: 0 This Week
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  • 13
    "Blue Planet" is a research project simulating the behaviour and darwinian evolution of unicellular lifeforms, each controlled by its own genetic program. Moreover, "Blue Planet Inhabitants" are suited for swarm intelligence and swarm research.
    Downloads: 0 This Week
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  • 14
    We experiment with Evolution of Artifical Neural Networks, combining the two fields of Evolutionary Computation and ANNs. Our methods are applied to a variety of interesting problems. To learn more, click on "Home Page", "Mail", or "Files".
    Downloads: 1 This Week
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