Open Source Python Scientific/Engineering Software - Page 60

Python module for manipulation of Crystallographic Information Framework (CIF) files

Python module to interface the CLIPS expert system shell library.

PyCancerDB is a source code distribution providing a Web-based interface for browsing and updating the Cancer Proteomics Database, together with scripts for maintaining the database.

Project to be released. Test.

An Economy Simulation with many Possibilities trying to be near to reality. Using XML, Python an OpenGL to make it useable on many OS. And also beeing an simulation taht can be so realistic that ist could be used for research (maybe).

Python app using wxWidgets that does some simple visualizations of topographical data, including 3D model, contour lines, and elevation profiles.

PyCosmic is a tool to detect and clean single images from the disturbing cosmic ray hits. It was designed and tested specifically for CALIFA and other fiber-fed integral-field spectroscopy dataset. It is written in Python and can be executed from the command line. New release is version v0.5. Updated to be compatible with numpy version 1.12. New release is version v0.4. It's now compatible with astropy for fits I/O and computation time is reduced by a factor of 2.

PyCrust is an interactive Python shell written in Python using wxPython. PyCrust is now part of wxPython (www.wxpython.org), so packaged files are no longer available here, and the latest development version has moved to the wxWindows CVS repository.

PyDQP implementes 11 different dual decomposition schemes, both first and second order, in order to solve quadratic programs in a distributed fashion.

This is a sophisticated & integrated simulation and analysis environment for dynamical systems models of physical systems (ODEs, DAEs, maps, and hybrid systems). It supports symbolic math, optimization, continuation, data analysis, biological apps...

PyDaylight turns the Daylight toolkit into a rapid application development system for chemical information by providing a full Python interface, including a true object layer, iterators, exceptions and useful libraries.

PyDespike is a cross platform (Windows, Mac, Linux) program written in Python using the PyQt and PyQwt libraries used to graphically process (despike) raman or other spectroscopic data in an efficient manner.

A Python function library to extract EEG feature from EEG time series in standard Python and numpy data structure. Features include classical spectral analysis, entropies, fractal dimensions, DFA, inter-channel synchrony and order, etc.

PyEPL (Python Experiment-Programming Library) is a library for coding psychology experiments in Python. It supports presentation of both visual and auditory stimuli, and supports both manual (keyboard/joystick) and sound (microphone) input as responses.

This is a webcam interface written in Python to control Google Earth. It is based on the atlasgloves.org project, and is in a very early development stage, this means: LOTS of bugs.

PyEsp - Enhanced/Evolving/Extensible Semantic Profiling. This Python program will sort and filter search results by applying semantic profiling on web pages. The program will learn the user preferences and profiling will be done on the client computer.

A simple interface for performing genetic algorithm optimization for numerical problems. I am starting with a stripped-down version, where a solution can be described using a single vector of float numbers. Eventually, I will expand to more generic data structures and add multiple-species search options. For the time being, I have no plans of developing a GUI. For now, this is strictly a computational module. In addition to the standard Python libraries, PyGAO uses numpy.

An easy-to-use python interface to GENESIS3.

PyGiNaC is a Python interface to the C++ symbolic math library GiNaC (www.ginac.de). Its design attempts to be an easy to use and convenient alternative to cint or ginsh.

PyGraphMath is a system for the manipulation of symbolic and numerical expr., equations, vectors .. (Maxima). Main focus lies on direct 3D graphical viewport (openGL) which displays math objects. Syntax is "pseudo-python" and supports objects, loops .. *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** OBSOLETE: please use instead http://www.sagemath.org/ with PyODE (or pyphyssim/PPE) *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** ***

Native FITS viewer/IRAF image server for Mac OS X.

IRAF image server for Mac OS X (pure Cocoa).

"PyLab Works" is a free and open source replacement for LabView + MatLab, written in pure Python. PyLab Works is much easier to learn and to extend than LabView and gives a much better programming environment than MatLab. Even kids can use it!

PyLife is an implementation of the game of life algorithm featuring parallel programming. It uses MPI and python to achieve a consistent software architecture and reliably performance.

PyMC is a Python library for probabilistic programming focused on Bayesian statistical modeling and machine learning. Built on top of computational tools like Aesara and NumPy, PyMC allows users to define models using intuitive syntax and perform inference using MCMC, variational inference, and other advanced algorithms. It’s widely used in scientific research, data science, and decision modeling.