Open Source Java Scientific/Engineering Software - Page 8
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Java Scientific/Engineering Software
View 202 business solutionsBrowse free open source Java Scientific/Engineering Software and projects below. Use the toggles on the left to filter open source Java Scientific/Engineering Software by OS, license, language, programming language, and project status.
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Custom VMs From 1 to 96 vCPUs With 99.95% UptimeLive migration and automatic failover keep workloads online through maintenance. One free e2-micro VM every month.
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Gemini 3 and 200+ AI Models on One PlatformBuild, govern, and optimize agents and models with Gemini Enterprise Agent Platform.
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OpenChrom is a tool for gas chromatography and mass spectrometry. The focus is to handle data files from different GC/MS and GC/FID systems and vendors. Its functionality and algorithms can be extended using a flexible plugin approach, based on Eclipse RCP.
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BioC
We describe a simple XML format to share text documents and annotation
A minimalist approach to share text documents and data annotations. Allows a large number of different annotations to be represented. Project files contain: - simple code to hold/read/write data and perform sample processing. - BioC-formatted corpora - BioC tools that work with BioC corpora BioC goals - simplicity - interoperability - broad use - reuse There should be little investment required to learn to use a format or a software module to process that format. We are interested in reuse, and we focus on common NLP tasks that are broadly useful for textmining. -
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AtomicJ
Application for analysis of AFM data
AtomicJ is an application for analysis of force microscopy recordings, including images and force curves. It allows for fast and reliable processing of single force curves and force maps, providing estimation of the mechanical properties of the sample. AtomicJ supports a wide range of contact mechanics models, including the models for blunt tips, the corrections for the effect of finite sample thickness, models of adhesive contact and models of spherical indentation of hyperelastic material. It implements novel procedures for analysis of force curves which allow for greater resistance to model deviations. AtomicJ can process force maps, it generates maps of Young’s modulus, adhesion force, transition indentation, sample height and the deformation. The results of force maps processing can be visualized in 3D. -
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The Distributed Genetic Programming Framework is a scalable Java genetic programming environment. It comes with an optional specialization for evolving assembler-syntax algorithms. The evolution can be performed in parallel in any computer network.
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Stop Cyber Threats with VM-Series Next-Gen Firewall on AzureGain integrated visibility across all traffic in a single pass. Deploy Palo Alto Networks VM-Series to determine application identity and content while automating security policy updates via rich APIs.
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Docear
An Academic Literature Suite
Docear (pronounced dog-ear) is what we call an “academic literature suite”. It integrates everything you need to search, organize and create academic literature in a single application: a digital library, reference manager, PDF and file manager, note taking and mind mapping. And the best: Docear works seemlessly with many existing tools like Mendeley, Microsoft Word, and Foxit Reader. Docear is free and open source, based on Freeplane, funded by the German Federal Ministry of Technology and developed by scientists from around the world, among others from OvGU, and the University of California, Berkeley. -
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Entrainer is a Java program (JRE 1.8.0_40+ required, available from http://java.sun.com/javase/downloads/index.jsp) which creates binaural beat frequencies with sound, light and animations for the purpose of entraining one's brain waves.
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This is a java based software that solves the following MCDA (Multicriteria Decision Aid) problems: Electre I, Electre I_s, Electre I_v, Electre II, Electre III, Electre IV, Electre TRI and Electre TRI ME.
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Navigational Algorithms
Navigational Algorithms - Marine navigation
- Celestial Navigation: Sight Reduction, Line Of Position, Fix... - Positional Astronomy: Nautical Almanac, RA, GHA, Dec - Coastal Navigation: Range, Bering, Horizontal angles, IALA... - Sailings: Rhumbs, Loxodromic, Orthodromic, Meridional parts... - Weather , Tides - Software: PC, Android https://sites.google.com/site/navigationalalgorithms/ -
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This project aims at creating an open source chemistry plugin / cartridge for the relational database system Oracle. Free Oracle chemistry cartridge.
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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sgmweka
Weka wrapper for the SGM toolkit for text classification and modeling.
Weka wrapper for the SGM toolkit for text classification and modeling. Provides Sparse Generative Models for scalable and accurate text classification and modeling for use in high-speed and large-scale text mining. Has lower time complexity of classification than comparable software due to inference based on sparse model representation and use of an inverted index. The provided .zip file is in the Weka package format, giving access to text classification. Other functions are usable through either Java command-line commands or class inclusion into Java projects. -
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A real-time graph plotter. While your application is computing and logging results to a CSV file using the LiveGraph Writer API, the plotter lets you visualise and monitor the results live - by instantly plotting charts and graphs of the data.
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CleverPsych Practice Management
FREE software to manage your psychology or allied health solo practice
CleverPsych is FREE software for psychologists and other allied health professionals who run their own practices. We have been using CleverPsych in our own practice in Australia since 2007. The system enables you to record your clients, appointments, services, organisations and referring doctors. The aim is to make operations like generating standard letters, claiming from the government and insurance companies, and reporting income, much easier. Look in the Files tab for DOWNLOAD and installation information. Download and execute CleverPsych.exe on Windows, otherwise you must download,unzip CleverPsych.zip to ~/Downloads/CleverPsych and run script. Look at the CleverPsych demonstration videos on Youtube and read the manual. The web site can also be accessed below. Mail me at cleverco@users.sourceforge.net (I am often away). Alternatively use the Discussion tab or post a ticket for problems. Error messages appear in the terminal window; you can mail a copy to me -
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Sinalgo is a simulation framework for testing and validating network algorithms. It allows for quick prototyping and verification in freely customizable network settings. It is mainly suited for packet-oriented wireless networks.
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Ghawwas_V4
An open source system for Arabic corpora processing
Ghawwas (previously known as Khawas) is an open source system for Arabic corpora processing. Ghawwas V4.0 provides the following main functions: a. Frequency list for single word and N-Grams b. Concordance c. Collocation (MI, CHI Squared, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient) d. Lexical patterns search e. Two corpora frequency profile comparison based on MI, CHI, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient f. Accept Windows and UTF-8 character encoding g. Accept TXT, DOC, DOCX, RTF and HTML formats h. Export the processing results in CSV file format -
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DkIT Bridge Designer
Dundalk Institute of Technology Virtual Bridge Design Competition
The DkIT Bridge Designer will provide you with a realistic introduction to engineering through an authentic, hands-on design experience. This software provides you with the tools to model, test, and optimize a steel highway bridge, based on realistic specifications, constraints, and performance criteria. Supported by Dundalk Insititute of Technology and All-Island Funds, this is a virtual bridge designer that allows kids of all ages learn about engineering and compete with their classmates! -
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EasyGeo
A cartography program with parameter adjustments and gravity fonctions
EasyGeo is an open source cartography program that generates maps using explicit equations in the choice of parameters. The input data is point data (not lines or areas) using csv files with object names (cities), variables (e.g. birth rate) and x and y coordinates. It is also possible to import maps in GeoJSON format. Possible output maps are: proportional circles, colour classes and interaction potential functions (Gravity models). Test data (10 countries and associated data) is provided with the program and located in the installation directory A user manual is also provided. -
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GeoKettle is a powerful, metadata-driven spatial ETL (Extract, Transform and Load) tool dedicated to the integration of different data sources for building and updating geospatial databases, data warehouses and services.
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LARS (Lightning Assessment of Risk for a Structure). LARS is a simple tool for the lightning assessment of risk for a structure, according to standard IEC 62305-2, second edition.
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MRCube
Meta-Model Management based on RDFs Revision Reflection
MRCube is a graphical editing tool of RDF-based contents developed for managing a relationship between RDF and RDFS contents. -
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jEPlus - Parametrics for E+ and TRNSYS
An EnergyPlus shell for parametric studies and more ...
Parametric analysis is often needed for exploring design options, especially when a global optimization method is not available, or the optimization result is in doubt. Parametric analysis can also be applied to all design variables simultaneously, which forms an exhaustive search that, providing that the search grid is fine enough, will guarantee a global optimum solution. In order to perform complex parametric analyses on multiple parameters with more than a handful of alternative values each, a tool to generate commands for the simulation model to run, and to collect results afterwards will be needed. jEPlus has been developed as such a parametric tool for EnergyPlus. To see jEPlus in action, check out this video: http://youtu.be/jBA7Q7npNK4 The source code of the jEPlus project is now hosted on GitHub: https://github.com/jeplus/jEPlus/ -
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OpenGTS (Open Source GPS Tracking System) is a full featured web-based GPS tracking system for your fleet of vehicles. It supports OpenLayers and other map providers, detail/summary Reporting, and various GPS tracking devices.
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Statcato is a Java software application for elementary statistics. Its features include data and graph generation, probability distributions, descriptive statistics, confidence intervals, hypothesis tests, correlation, regression, and analysis of var
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AntibiogramJ
AntibiogramJ is a Java program for the reading of antibiogram-images
AntibiogramJ is a Java program for the identification, measurement and categorisation of inhibition zones in antibiogram images captured with any device that incorporates a camera (including digital cameras and mobile phones). Citing AntibiogramJ: A. Alonso, C. Domínguez, J. Heras, E. Mata, V. Pascual, C. Torres, and M. Zarazaga. AntibiogramJ: a Tool for Analysing Images from Disk Diffusion Tests. Computer Methods and Programs in Biomedicine 143:159-169. 2017. DOI: http://dx.doi.org/10.1016/j.cmpb.2017.03.010 You can see more information about AntibiogramJ in https://sourceforge.net/p/antibiogramj/wiki/Home/ Several videos explaining the use of AntibiogramJ are available in https://sourceforge.net/p/antibiogramj/wiki/Videos/ AntibiogramJ includes now the EUCAST v.9.0. Please address any question or comment to joheras at gmail.com -
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OpenVigil
Open pharmacovigilance data extraction, mining and analysis tool
OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting ratio or reporting odds ratios) and export to spreadsheets programs like Microsoft Excel or statistics programs like R. OpenVigil 1 operates on raw data, OpenVigil 2 on cleaned data (using drugbank.ca and drugs@FDA), OpenVigilFDA uses the official FDA online API. OpenVigil 2 supports query for ATC codes or certain chemical moieties. Other tools of the OpenVigil project include a calculator for measurements of disproportionality for a 2x2 contingency table and a drugname mapper using RxNorm. -
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ReadSeq is a program and library for conversion of biosequence data from one format to another, useful in various bioinformatics programs and services. It is written in Java, though an earlier version in C remains available.
