Showing 2566 open source projects for "using"

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  • Find Hidden Risks in Windows Task Scheduler Icon
    Find Hidden Risks in Windows Task Scheduler

    Free diagnostic script reveals configuration issues, error patterns, and security risks. Instant HTML report.

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    AI-generated apps that pass security review

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  • 1
    ...It uses approximate string matching technique and protein domain analysis to detect intact LTR retrotransposons. In addition, it identifies partially deleted or solo LTRs using profile Hidden Markov Models (pHMMs). MGEScan-non-LTR is a software for the identification of non-LTR retrotransposons in genomic sequences, following a computational approach inspired by a generalized hidden Markov model (GHMM). References: 1. M. Rho et al., "De novo identification of LTR retrotransposons in eukaryotic genomes", BMC Genomics (2007) 8:90. 2. ...
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  • 2
    EASEA
    EASEA (EAsy Specification of Evolutionary Algorithms: pronounce "easy") is a high-level language dedicated to the specification of evolutionary algorithms. EASEA up to version 0.7 compiles .ez specification files into C++ or JAVA object files.
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  • 3

    Protdraw

    Create portable, flexible domain drawings of protein sequences

    ...Go to https://github.com/eserte/perl-tk and click the Download zip button. Run the unzip command, cd to the extracted directory and follow the directions in the 'INSTALL' file (using 'sudo' if necessary). ProtDraw creates flexible, easily-interpretable and portable illustrations of the domain structures of input sequences. ProtDraw is accompanied by makeProtDraw, a helper program which runs hmmer3 on a specified set of hidden Markov models and formats results for ProtDraw. Highest-scoring domains are selected in cases of overlap. ...
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  • 4

    Gene Ontology Browser

    Browser for viewing Gene Ontology (GO) .obo files.

    Go Browser allows you to view a gene ontology on your local machine. You can go up and down the hierarchy and inspect the terms. It's a good way of familiarising yourself and orienting yourself in the GO system. It's built using the Baby X toolkit, so has no dependencies other than xlib. Baby X has now also been ported to Windows, so a Windows version is available.
    Downloads: 1 This Week
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  • Atera all-in-one platform IT management software with AI agents Icon
    Atera all-in-one platform IT management software with AI agents

    Ideal for internal IT departments or managed service providers (MSPs)

    Atera’s AI agents don’t just assist, they act. From detection to resolution, they handle incidents and requests instantly, taking your IT management from automated to autonomous.
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  • 5
    IRPF90
    WARNING: Project moved to http://github.com/scemama/irpf90 IRPF90 is a Fortran90 preprocessor written in Python for programming using the Implicit Reference to Parameters (IRP) method. It simplifies the development of large fortran codes in the field of scientific high performance computing.
    Downloads: 1 This Week
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  • 6

    ExactCalc

    Software for exact computing based on interval arithmetic.

    ...Sometimes is more easy to use numerical unstable algorithm to solve problem. Instability is actually speed of accumulating the truncation error, but it can be decreased arbitrary by using more precise computation. Interval arithmetic provides us control of accumulating truncating error. To save Your time using CPU time this program provides interpreter of simple programming language based on interval algebra with arbitrary precision arithmetic.
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  • 7
    IsItQt (Qt)

    IsItQt (Qt)

    Identifies if Linux program was created by Qt and version!

    IsItQt is a Linux console application to identify if the program was created using Qt and in most cases, using which version of Qt was it created. Article about usage: http://www.cplusplus.com/articles/y3TbqMoL/
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  • 8

    libdwt

    a cross-platform discrete wavelet transform library implemented in C

    libdwt is a cross-platform discrete wavelet transform library implemented in C language. The library implements fast wavelet transform algorithm using lifting scheme. Cohen-Daubechies-Feauveau wavelets with 4 vanishing moments were used.
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  • 9
    Arcadia is a light-weight, cross-platform, C++ desktop application designed for visualizing biological networks such as metabolic pathways.
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  • Total Network Visibility for Network Engineers and IT Managers Icon
    Total Network Visibility for Network Engineers and IT Managers

    Network monitoring and troubleshooting is hard. TotalView makes it easy.

    This means every device on your network, and every interface on every device is automatically analyzed for performance, errors, QoS, and configuration.
    Learn More
  • 10
    ADopenPOWERLINK

    ADopenPOWERLINK

    openPOWERLINK with Analog Devices ADSP-CM408F Mixed Signal Controller

    ADopenPOWERLINK is an open source Ethernet Powerlink Controlled Node (Slave) solution using the Analog Devices ADSP-CM408F mixed signal processor (http://www.analog.com), along with Altera FPGA as network communication processor. The solution is based on openPOWERLINK provided by SYSTEC electronic (http://www.systec-electronic.com), B&R (http://www.br-automation.com) and Kalycito (http://www.kalycito.com). This release contains the necessary and required packages and documentation to setup the power-link controlled node using Analog Devices ADZS-CM408 EZLITE development board (http://www.analog.com/en/processors-dsp/cm4xx/adsp-cm408f/products/cm40x-ez/eb.html) as application processor, and a Terasic DE2-115 Altera FPGA development board as a communication processor.
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  • 11

    Planar Roof Top Detection in LiDAR

    This tool detects and classifies roof tops from raw spatial LiDAR

    A new algorithm for extracting roof tops was developed. Using the assumption that roof tops are planar in construction, a new approach was developed using volume of point clouds to determine whether a cluster contains planar points. This approach yields very promising results and with attention applied to its weaknesses, should provide another algorithm which can rival currently available roof top detection methods.
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  • 12

    XNDiff

    X-ray and Neutron powder pattern simulation analysis

    Keywords (XNDiff): -SAXS -SANS -absolute units -core (double)shell crystalline nanoparticles -with a parallelepidal shape -particle assemblies -powder and ensemble average -C/C++ -Unix -OpenMP -HPC Cluster Keywords (BatchMultiFit): -simultaneous fits for several SAXS and SANS curves with simulation data from XNDiff -SANS data can be smeared with dq values from experimental data sets or analytical functions -Mathematica console -local and global optimizers (simulated annealing, differential evolution, Nelder-Mead, ...) can be used -range for fit parameters and further constraints between fit parameters -parallelized (typ. 4-8 threads) TODO (BatchMultiFit): -read and use errorbars from experimental data sets -allow different q-ranges for different data sets in the fits -rewrite and test in Python using e.g. the lmfit module: https://pypi.python.org/pypi/lmfit/ to get rid of Mathematica and to run it on HPC clusters
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  • 13
    numericstream

    numericstream

    tools to take data from instruments to networks

    ...This starts with a driver, taking serial ascii data to an SQLite database. Subsequently client applications can take this data to display on webpages, export to text file, and almost anything else. The driver has been written using the mingw port of the gcc compiler, currently the system runs on Windows XP, however the design is deliberately cross platform, and linux based serial port interfaces will be added. The first client is written in php, and tested using the Apache web server. The client is currently a proof of concept, and needs some work!
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  • 14
    GOFG Sports Computer

    GOFG Sports Computer

    Free GPS tracking software for your workouts.

    ...In addition it allows to sozialize your sports experience by sharing your exercises on gofg.at, facebook and twitter. The most important features are: - GPS tracking of your training - upload workouts to gofg.at and share them using twitter and facebook - analyze your exercises using a map-display & altitude graph - keep track of various statistics like ODO-meter - ships with English, German, Italian and Spanish user interface - export to Fitlog, TCX and GPX Currently Android, iOS and Windows Phone 7 & 8 are supported.
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  • 15
    EVSoftware - TWD: Tracing Wave Drawing

    EVSoftware - TWD: Tracing Wave Drawing

    Wave Audio copy based on a background image.

    TWD: Tracing Wave Drawing is a tool used to copy using Bezier curves one audio wave based on a background image then export data to floating point or Wav Audio. The bezier curves generated data "," floating that are stored in a text box are the coordinates of each segment consisting of the waveform, only in this way can be exported waveform copied and import it into another instrument hardware or software ..
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  • 16

    Symetrix SymVue Automation

    An example using Symetrix SymVue to control third-party applications.

    In this example we'll have SymVue manage a few lighting presets in Daslight, a third-party lighting control application.
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  • 17
    resParser

    resParser

    Command line scientific calculator

    resParser is a command line scientific calculator exploiting "50 digit precision" floating point computations using GMP and MPFR library. The project is open source with GLP v2 licence and cross platform. It is implemented with QT for GUI and for useful classes like QString. In the begin it was just a tool for computation of resistors values. Very similar to Speed Crunch as features Features: * Command line input * Built-in functions (log, exp, sin, cos,
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  • 18
    Software for automated acquisition and analysis of paleomagnetic and rock magnetic data using the RAPID System.
    Downloads: 1 This Week
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  • 19
    ViennaGrid is a generic mesh handling library that provides the traversal of structured and unstructured grids in arbitrary spatial dimensions, in particular 1d, 2d and 3d. Quantities can be conveniently stored on mesh elements using ViennaData.
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  • 20
    phcfM

    phcfM

    R package for modelling anthropogenic deforestation

    ...It was named after the REDD+ pilot-project 'programme holistique de conservation des forêts à Madagascar'. phcfM includes two main functions: (i) demography(), to model the population growth with time in a hierarchical Bayesian framework using population census data and Gaussian linear mixed models and (ii) deforestation(), to model the deforestation process in a hierarchical Bayesian framework using land-cover change data and Binomial logistic regression models with variable time-intervals between land-cover observations. The two functions use embedded Gibbs samplers written in C++ with the Scythe statistical library to reduce computational time.
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  • 21
    3D shape descriptor which explicitly captures the local geometry and encodes it using an efficient representation. Our method consists of multiple evolving fronts which are realized by a set of growing spheres on the surface.
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  • 22

    CAPE RNA

    Classification based Analysis of Paired Expression data of RNA

    CAPE RNA is package of command-line tools for integrated analysis of miRNA-mRNA expression data. miRNA-mRNA interaction states are assigned for each sample independent of a priori known experimental groups. Using these interaction classifications Jaccard-indexes are calculated to evaluate the quality of a predicted interaction based on the distribution of assigned interaction states compared to experimental groups. In addition, negative correlation between miRNA and mRNA expression can be analyzed.
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  • 23

    Scientific data elaborator

    The data elaborator is a new project to manage scientific data

    This program can make histograms, table and graphics of datas, study the error propagation during a measure, it is usefull if you have to do study errors propagations. The output are latex files, so it is easy for you just put them into your relations.
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  • 24

    Block Matrix library

    Highly efficient implementation of BLAS for sparse block matrices.

    Highly efficient implementation of BLAS for sparse block matrices. Accelerated using heavy-duty C++ meta-programming, SIMD instructions and GPU.
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  • 25

    Leeds Census Tool

    Using Excel 2010 and VBA to create a data reporting tool for Leeds

    Excel allows the simple creation of reports and tables, this project is to create an API for the manipulation of Census and other data in such a way that customizable reports and tables can easily be generated for any (and aggregated) geographies from Census and other available data.
    Downloads: 0 This Week
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