Showing 417 open source projects for "ontology"

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    Case Management Software for Social Services

    For human services organizations looking for case management software

    Collaborate is customizable case management software for non-profits and social services agencies with teams of 5+ staff.
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    Desktop and Mobile Device Management Software

    It's a modern take on desktop management that can be scaled as per organizational needs.

    Desktop Central is a unified endpoint management (UEM) solution that helps in managing servers, laptops, desktops, smartphones, and tablets from a central location.
  • 1
    Common Core Ontologies

    Common Core Ontologies

    The Common Core Ontology Repository

    The Common Core Ontologies (CCO) comprise twelve ontologies that are designed to represent and integrate taxonomies of generic classes and relations across all domains of interest. CCO is a mid-level extension of Basic Formal Ontology (BFO), an upper-level ontology framework widely used to structure and integrate ontologies in the biomedical domain (Arp, et al., 2015). BFO aims to represent the most generic categories of entity and the most generic types of relations that hold between them...
    Downloads: 2 This Week
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  • 2
    QFramework

    QFramework

    Unity3D System Design Architecture

    QFramework is to provide a set of simple, powerful, easy-to-use, SOLID principles, support domain-driven design (DDD), event-driven, data-driven, layered, MVC, CQRS, modular, easy-to-extend architecture, her source code is only Up to line 800, you can completely save it in your notes app. Presentation layer: ViewController layer. The IController interface is responsible for the performance when receiving input and state changes. In general, MonoBehaviour is the presentation layer. System...
    Downloads: 0 This Week
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  • 3

    Mathematical Modelling Ontology

    Ontology of types of mathematical models, and their properties

    The Mathematical Modelling Ontology (MAMO) is a classification of the types of mathematical models used mostly in the life sciences, their variables, relationships and other relevant features.
    Downloads: 0 This Week
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  • 4
    AminePlatform

    AminePlatform

    Amine is a Multi-Layer Platform for the dev. of Intelligent Systems

    Amine is an Artificial Intelligence Multi-Layer Java Open Source Platform dedicated to the development of various kinds of Intelligent Systems and Agents (Knowledge-Based, Ontology-Based, Conceptual Graph -CG- Based, NLP, Reasoning and Learning, Natural Language Processing, etc.). Ontology, KB can be created and manipulated with various processes. CG theory is used as the main knowledge representation language. Amine provides two languages: PROLOG+CG which extends PROLOG with CG and Amine...
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    Downloads: 64 This Week
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    Manage Properties Better For Free

    For small to mid-sized landlords and property managers

    Innago is a free and easy-to-use property management solution. Whether you have 1 unit or 1000, student housing, or commercial properties, Innago is built for you. Our software is designed to save you time and money, so you can spend more time doing the things that matter most.
  • 5
    ChatScript
    ChatScript is the next generation chatbot engine that won the 2010 Loebner Prize with Suzette, 2011 Loebner with Rosette, and 2nd in 2012 Loebner with Angela (a bug I introduced in the Loebner protocol, not the engine). The technology behind Outfit7's mobile app Tom Loves Angela and ESL chatbots at Japan's SpeakGlobal. 3rd place winner Chatbot Battles 2012 and awarded best 15 minute conversation prize. 3rd place Loebner winner for 2013 and 1st place in 2014 and 2015. Also has useful ontology...
    Downloads: 36 This Week
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  • 6
    Flora-2
    Flora-2 is a powerful knowledge representation and reasoning system designed for building knowledge-intensive applications. It is based on F-logic, HiLog, Transaction Logic, and also supports defeasible reasoning. Applications include intelligent agents, Semantic Web, ontology management, and more. If you use Flora-2 and like it, please acknowledge it in your project!
    Downloads: 9 This Week
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  • 8
    DeeProtGO

    DeeProtGO

    DeeProtGO is a deep learning model for predicting GO terms of proteins

    This project contains the source code of DeeProtGO as well as an example of its use when predicting GO terms of the biological process sub-ontology for eukaryotic proteins.
    Downloads: 8 This Week
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  • 9

    MELO

    Machine Executable Language Ontology (MELO)

    This project is intended to fill the gap between the semantic web and the mainstream of software engineering, especially to integrate the semantic web with programming languages, and find an ontological representation of programming languages, including abstract syntax code execution, and global interoperability in execution environments. The machine executable language is modelled in OWL 2 DL using OWL API in C++ developed in this project.
    Downloads: 0 This Week
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    Make Recruiting and Onboarding Easy

    Simple, easy-to-use applicant tracking and employee Onboarding system for any sized organization.

    Take away the pain and hassle associated with applicant recruitment, hiring, and onboarding with ApplicantStack. Designed for HR professionals and recruiters, ApplicantStack helps streamline the recruiting and onboarding processes to improve productivity and reduce costs. ApplicantStack provides a complete toolkit that includes tools for posting, launching, and advertising jobs, assessing and managing candidates, collaborating with teams, centralizing information for quick hiring and onboarding, and more.
  • 10
    UnBBayes

    UnBBayes

    Framework & GUI for Bayes Nets and other probabilistic models.

    UnBBayes is a probabilistic network framework written in Java. It has both a GUI and an API with inference, sampling, learning and evaluation. It supports Bayesian networks, influence diagrams, MSBN, OOBN, HBN, MEBN/PR-OWL, PRM, structure, parameter and incremental learning. Please, visit our wiki (https://sourceforge.net/p/unbbayes/wiki/Home/) for more information. Check out the license section (https://sourceforge.net/p/unbbayes/wiki/License/) for our licensing policy.
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    Downloads: 3 This Week
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  • 11

    GOBU

    Gene Browsing Utility

    Gene Ontology Browsing Utility (hereinafter, GOBU, pronounced as "go-boo") is a browsing and manipulating tool for Post-Pipeline genetic data, especially useful for data with GO annotations. With help of GOBU, we expect biologists and their cooperating technicians can pay less effort on common programming stuff. At the same time, GOBU provides an Extendable Architecture which guarantees the possibility of 1. Arbitrary Data Description, 2. Data Integration, and 3. Extendable User Interface.
    Downloads: 0 This Week
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  • 12
    Eddy

    Eddy

    An editor for the specification of Graphol ontologies

    ... functionalities which prevents ontology designers from constructing invalid Graphol expressions: feedback on the validity of the expression is given through color coding diagram elements. Eddy also supports the standard profiles of OWL 2, i.e. OWL 2 QL, OWL 2 RL, and OWL 2 EL (to appear). Moreover, to support interaction with third-party tools such as OWL 2 reasoners and editors like Protégé, Eddy is able to export the produced Graphol ontology into an OWL 2 ontology.
    Downloads: 2 This Week
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  • 13
    TRAK Metamodel

    TRAK Metamodel

    Tuples (triples) for TRAK enterprise architecture viewpoints and views

    The definition of the metamodel for TRAK (defines allowed AD elements and relationships i.e. tuples/ triples for the TRAK viewpoints and views). TRAK is a general systems-thinkers'/system engineering enterprise architecture framework. It is simple, user-friendly, pragmatic and not limited to IT. Forms basis for RDF + OWL ontology description - see https://trakmetamodel.sourceforge.io/vocab/TRAK_metamodel.html
    Downloads: 0 This Week
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  • 14
    mimosa
    Mimosa is a modeling and simulation platform, covering the process from building conceptual models to running the simulations. The specification uses ontologies and an extensible set of formalisms for the dynamics. The simulation kernel is based on DEVS.
    Downloads: 1 This Week
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  • 15

    IndustrialMaintenanceOntology

    OWL ontology that represents the core of industrial maintenance domain

    Downloads: 0 This Week
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  • 16

    GENET-CNV

    Integrated DNA copy number variation and gene expression analysis

    The Boolean implication networks outperformed Bayesian networks, Pearson’s correlation networks, and other Boolean networks in constructing genome-scale co-expression networks evaluated with comprehensive biological pathways and Gene Ontology in MSigDB. References: Guo NL, Wan YW. Pathway-based identification of a smoking associated 6-gene signature predictive of lung cancer risk and survival. Artificial Intelligence in Medicine 2012 Jun;55(2):97-105. Ye Q, Singh S, Qian PR, Guo NL. Immune...
    Downloads: 0 This Week
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  • 17

    simpleowlapi

    A light-weight wrapper for the OWLAPI

    simpleOWLAPI is a light-weight wrapper for the OWLAPI that enables faster programmatic development of OWL ontologies with more concise code using the power of the Manchester OWL Syntax and related parsers. The wrapper does not make use of all the features of the more powerful OWLAPI. Rather, it is designed specifically for rapid and concise ontology construction in workflows involving semantic data engineering. It can also be used in contexts such as educational and demonstration settings...
    Downloads: 0 This Week
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  • 18
    Product Design Requirement Ontology Model (PDROM) provides rich requirement semantics. The model supports a new level of engineering requirement storage and analysis by addressing different facets of requirement specifications. PDROM consists of two main parts: (I) Part I is for requirement representation and description of a requirement and (ii) Part II is to support requirement generation and links between product requirements and design rational.
    Downloads: 0 This Week
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  • 19
    Kinetic Simulation Algorithm Ontology
    The Kinetic Simulation Algorithm Ontology (KiSAO; http://co.mbine.org/standards/kisao) is an ontology of algorithms for simulating and analyzing biological models, as well as the characteristics of these algorithms, their input parameters, and their outputs. In addition, KiSAO captures relationships among algorithms, their parameters, and their outputs. Development of KiSAO has moved to https://github.com/SED-ML/KiSAO/.
    Downloads: 1 This Week
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  • 20
    The presented tool, called ONTOOL, allows for creating UML class diagrams on the basis of the selected OWL domain ontologies, and verifying if the diagrams are compliant with the ontologies. ONTOOL additionally allows for normalizing any syntactically correct and consistent ontology expressed in OWL. ONTOOL has been tested with a number of test cases, and empirically evaluated through conducting an experiment. The tool has been implemented as a proof of concept of the methods proposed...
    Downloads: 0 This Week
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  • 21
    Fun4Me

    Fun4Me

    A package for functional annotation for metagenomes

    This package includes a few programs for rapid functional annotation for metagenomic sequences, including, 1) Gene prediction by FragGeneScan; 2) Similarity search by RAPSearch2; 3) Functional annotation in GO (Gene Ontology) and EC (Enzyme Commission) based on similarity search results; 4) From EC to metabolic pathway reconstruction by MinPath. Inputs: Just sequencing reads (or assemblies) Outputs: Protein-coding genes (or gene fragments); similarity search; functional annotations (in GO...
    Downloads: 1 This Week
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  • 22

    MoPAC

    The Modular Pipeline for the Analysis of CRISPR screens

    To facilitate the comparison of gene essentialities in two or more cell samples, we propose MoPAC (Modular Pipeline for Analysis of CRISPR screens), a Shiny-driven interactive tool for differential essentiality analysis in CRISPR/Cas9 screens. For installation and usage instructions please refer to the wiki page.
    Downloads: 10 This Week
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  • 23

    ART JADE

    ART Ontology and Protocols in JADE

    Ontology and Protocols of Agent Reputation and Trust testbed using JADE platform.
    Downloads: 0 This Week
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  • 24
    Downloads: 0 This Week
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  • 25

    UFO-Cytoscape

    Ontology-based semantic similarity calculation and visualization

    Motivation: Biomedical ontologies have been growing quickly and proven to be useful in many biomedical applications. The use of this data is mainly based on semantic similarity calculation between ontology terms and between annotated biomedical entities. Many semantic similarity measures have been proposed for such calculation. Results: A number of tools have been developed on different platforms for ontology visualization and semantic similarity calculation. However, these tools have...
    Downloads: 0 This Week
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