Search Results for "cell" - Page 2
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Showing 76 open source projects for "cell"
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XRD CUBIC
Simulate crystal cell length (a), Miller indices {h, k, l}, d-spacing
This is a basic computer program (coded in Python) to simulate possible unit crystal cell length (a), Miller indices - {h, k, l} and interplanar spacing (d) for cubic crystals from observed (experimental) X-ray diffraction (XRD) angle, 2-theta. It can simulate all these possible crystal lattice parameters for cubic crystal systems between the given 2–theta values within the range of specified cell length (a) limits. 1. -
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IdleX - IDLE Extensions for Python
IDLE Extensions
A collection of extensions for Python's IDLE, the Python IDE built with the tkinter GUI toolkit. -
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The Development System for Auditory Modelling (DSAM) is a computational library designed specifically for producing simulations of the auditory system. It brings together many established auditory models within a flexible programming platform.
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SkyWater PDK
Open source process design kit for usage with SkyWater Technology
...It provides the essential artifacts for digital and analog flows: SPICE models, DRC/LVS rules, extraction decks, and technology files for open tools like Magic and KLayout. Standard-cell libraries and IO pads are included so digital designers can use open synthesis and place-and-route to reach a manufacturable GDS. Because the PDK is open, it becomes a common target for community reference designs, open tapeouts, and teaching curricula. Documentation and example flows show how to assemble complete toolchains, from RTL to sign-off, using open EDA components. ... -
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SCiDA Pro
Program for solar cell production data analysis
The purpose of the SCiDA Pro program is to help with processing solar cell production data. It has the following features: - Able to handle large data sets in a fast way (e.g. plotting 100k cell data takes a few seconds) - Easy data filtering - Easy generation of a data summary report - Extensive data plotting features - Cross-platform (Windows/Linux/MacOS) - Supports multiple languages -
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DESC Pro
Discrete event simulation for solar cell production
The aim of the DESC Pro program is to try to capture the dynamics of modern solar cell production lines using discrete event simulation techniques. All process and transportation events within the whole line can in principle be included in the simulations, which gives the advantage that dynamic aspects such as planned maintenance and random micro-stops can easily be taken into account. -
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DEBay
Deconvolutes qPCR data to estimate cell-type-specific gene expression
DEBay: Deconvolution of Ensemble through Bayes-approach DEBay estimates cell type-specific gene expression by deconvolution of quantitative PCR data of a mixed population. It will be useful in experiments where the segregation of different cell types in a sample is arduous, but the proportion of different cell types in the sample can be measured. DEBay uses the population distribution data and the qPCR data to calculate the relative expression of the target gene in different cell types in the sample. ... -
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CTOSC
Tools for processing solar cell characterization data (Rsh,ECV,QSSPC)
CTOSC stands for 'Characterization Toolbox for Solar Cells' and contains a few functionalities to process solar cell data: sheet resistance mapping, making ECV data graphs, QSSPC lifetime data graphs and showing/averaging PL/EL images. For ECV/Rsh/QSSPC data the program currently supports output files from the Sunlab Sherescan four-point probe (.txt), the WEP Wafer Profiler CVP21 (.csv) and Sinton WCT-120 (.txt). -
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NYCOpenData-Profiling-Analysis
Open Data Profiling, Quality and Analysis on NYC OpenData dataset
Open data often comes with little or no metadata. You will profile a large collection of open data sets and derive metadata that can be used for data discovery, querying, and identification of data quality problems. For each column, identify and summarize the semantic types present in the column. These can be generic types (e.g., city, state) or collection-specific types (NYU school names, NYC agency). For each semantic type T identified, enumerate all the values encountered for T in all... -
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Molecular Dynamics Studio
Molecular Dynamics Cell Construction
...NanoEngineer-1 is a molecular CAD software written by Nanorex and provides the user an easy way to create molecules, while the software modifications allow the user to type atoms using multiple force fields. PACKMOL can generate a random collection of molecules using the molecule templates from NanoEngineer-1 thus providing the initial MD cell. Modifications to PACKMOL allow the atom type data to be passed through to the MSI2LMP software. MSI2LMP creates a LAMMPS input file based on class I or class II force fields. MSI2LMP was modified to use numerically coded force field data generated by NanoEngineer-1. The MMP file format was extended and integrated into all three software applications. ... -
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PyPWD
A Python3 Password Manager, with encryption and without connection
https://www.garanet.net/it-blog/python-password-manager/ A Python3 Password Manager, with encryption and without an Internet connection. How it Works: First Run: PyPWD > Creates Master Key with your master username and password (Do not forget it or modify the config file, otherwise you'll be not able to open your password manager anymore). PyPWD > Saves a DataFrame as an encrypted CVS and all passwords are encrypted too, with key and the master password. Login: PyPWD >... -
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pyfolio
Portfolio and risk analytics in Python
pyfolio is a Python library for performance and risk analysis of financial portfolios developed by Quantopian Inc. It works well with the Zipline open source backtesting library. At the core of pyfolio is a so-called tear sheet that consists of various individual plots that provide a comprehensive image of the performance of a trading algorithm. Here's an example of a simple tear sheet analyzing a strategy. Quantopian also offers a fully managed service for professionals that includes... -
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pyspread
Python spreadsheet application
...The goal of pyspread is to be the most pythonic spreadsheet. Pyspread expects Python expressions in its grid cells, which makes a spreadsheet specific language obsolete. Each cell returns a Python object that can be accessed from other cells. These objects can represent anything including lists or matrices. Dependencies + Python (>=2.7, <3.0) + numpy (>=1.1.0) + wxPython (>=2.8.10.1, Unicode version required) + matplotlib (>=1.1.1) + pycairo (>=1.8.8) Optional dependencies + python-gnupg (>=0.3.0, for opening own files without approval) + xlrd (>=0.9.2, for loading Excel® files) + xlwt (>=0.9.2, for saving Excel files, pyspread >=v0.3.0 required) + jedi (>=0.8.0, for tab completion and context help in the entry line, pyspread >=v0.3.0 required) + basemap (>=1.0.7, for the weather example pys file) -
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Jupyter Themes
Custom Jupyter Notebook Themes
jupyter-themes brings theme management to classic Jupyter Notebooks with a command-line tool that can restyle the interface, code cells, and UI chrome in seconds. It ships a catalog of popular dark and light themes and lets you customize fonts, font sizes, cell widths, and toolbar visibility so the notebook matches your preferred reading and coding ergonomics. The theming system adjusts CodeMirror syntax highlighting to keep code legible against chosen backgrounds and provides options to harmonize matplotlib/plotly colors for cohesive visuals. Installation and usage are streamlined through a single jt command, with flags to set or preview themes and a built-in restore option to return to defaults. ... -
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Microarray Integrator (MAI)
Microarray Integrator for heterogeneous human/mouse Affymetrix arrays
The Microarray Integrator is freely available programs to integrate heterogeneous Affymetrix microarrays for human and mouse. The cell-type-specific genes or condition-specific genes can be screened in the integrated microarrays by MAI result. -
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CellPD
Cell Phenotype Digitizer
This is an open source project to estimate cell cycle and other parameters based upon experimental time course data. Navigate to Files-->CellPD-->[version]-->[Operating System] Each download contains CellPD's source code, a Python virtual environment, and a tutorial on how to use CellPD. Tutorial TL;DR: Save your data (using the provided template) in the same folder as CellPD, then double click on runCellPD. -
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FAST Simulations
An Open source Analysis and SImulation Toolbox for Fuel Cells
FAST is an Analysis and Simulation Toolbox (FAST) for Fuel Cells (FC) FAST-FC is the doctorate work of David B. Harvey and was developed with support from the U.S. DOE, Ballard, and Queen's University. Derivative works of FAST-FC include FC-APOLLO which is a forked branch of this project intended to capture the code state at the exit of the funded DOE project. FAST-FC is the open and active community branch. FAST-FC is developed and maintained by the original creator and... -
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Excel COM API for Python
Python class to communicate with Ecxcel via COM interface
Python class for communicate with Excel via COM interface. The "excel_com" inside excel_com.py is basic class. Usage examples can be found in example.py Other files may be seen as additional examples of usage for "excel_com" class. Any suggestions or comments welcomed. -
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Virus QSP Modeling
C++ and Python code for simulating RNA virus replication
Stochastic simulation model of poliovirus Sabin-to-Mahoney genetic state transition (C++ code). Models genotypes, virus populations, and quasispecies cloud. Simulates replication error and copy-choice recombination. Various parameters guiding the model are user-specified. Python code post-processes simulation output to produce report files. -
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HuaweiConfigurationManager
Improve the efficiency of R&D engineers
This is old project please refer to https://sourceforge.net/projects/emaossmanager/ Improve the efficiency of R&D engineers Parsers BSC&RNC MML Scripts BSC&RNC Alarms logs BSC&RNC Operation logs ENODEB XML Configuration ENODEB SON Log BSC&RNC&NODEB&ENODEB License NODEB&ENODEB Inventory M2000 Alarm logs M2000 OpLog logs M2000 CME NBI R915 M2000 EAM configuration ASSET Cell export file Tools & Analyzers Command View Device GUI BSC&RNC View Compare Manager SQL Connection View Template Handle Switch View MML Redirection Reader Fault Diagnosis SON Dashboard Operation log Analysis NodeB XML2MML MML Discrepancy Geo-data Manager KMZ Generator SQL Expert MapInfo Export Backup Manager Export Manager Aircom Asset Northbound Interface -
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Spatio-temporal simulation environment (STSE) is set of tools used to perform spatio-temporal simulations, dedicated mainly to biological systems. Main development language is Python. Tools are currently based on: EPD, VTK, qhull, openalea, PlantGL.
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FABS
Fluorescence and absorption spectroscopy made easy
FABS is a program designed to run a fluorescence/absorption spectrometer on Windows. The program analyzes spectra and provides graphs and data files. Users may choose to input video files from cell phones or other cameras, still images, or even live streams of video from webcams. FABS can perform any necessary calibration and image preprocessing. Experienced users have a number of more advanced options such as background subtraction, adjustments for nonlinearities in detector response, and graph smoothing. FABS was designed with students in mind, as a way to help high schoolers and undergraduates learn about spectroscopy without paying for expensive equipment and software. ... -
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Cell Defender
A mobile tower 3D tower defense/defend the flag game
This simple little game is like few others. It's a surivial game with few rules. 1. Defend the center square from the invading robots! 2. You can only the "Colored" Defender units to do so. 3. Let 10 Robots in and your game is over! 4. No end survive and rack up as many points as you can! This project uses Python-Ogre, a wrapper for the original Ogre 3D. Please try it out, more versions soon! -
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calc2booktab.latex
Script for OpenOffice/LibreOffice to convert tables to Latex-Code
UPDATE: The project was moved to github (https://github.com/schober-ch/calc2booktab). The soruceforge page won't get any bugfixes, please use the github repo if you want to try this macro. -------------------------------------------------------------------------- A Python extension for OpenOffice/LibreOffice to convert selected cells to LaTeX-Code. Its similar to Calc2Latex, but typographic formatting is more advanced (numeric columns, dcolumn-package, booktab-package) Script is... -
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PolyCTLDesigner
Python scripts for designing polyepitope T-cell immunogens
...PolyCTLDesigner is also able to choose antigenic peptides covering selected HLA repertoire with desired redundancy rate. Given the antigen sequences PolyCTLDesigner is also able to select T-helper epitopes. For predicting T-cell epitopes it uses TEpredict.
