Showing 5827 open source projects for "gnu science"

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  • 1

    ccgsl

    Use Gnu Scientific Library as if it were writtem in C++.

    The ccgsl provides simple C++ wrappers for the GNU Scientific Library. It uses Java-like shared-pointer classes in place of structs to avoid direct memory allocation/freeing and to work better with the STL. It lets you construct functions for optimisation, root-finding and the like from C++ member functions, making it easier to integrate with existing C++ code. It also provides C++ exceptions.
    Downloads: 2 This Week
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  • 2

    CPAT

    RNA coding potential assessment tool

    Using RNA-seq, tens of thousands of novel transcripts and isoforms have been identified (Djebali, et al Nature, 2012 , Carbili et al, Gene & Development, 2011) The discovery of these hidden transcriptome rejuvenate the need of distinguishing coding and noncoding RNA. However, Most previous coding potential prediction methods heavily rely on alignment, either pairwise alignment to search for protein evidence or multiple alignments to calculate phylogenetic conservation score (such as CPC ,...
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    Downloads: 30 This Week
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  • 3
    crossmap

    crossmap

    convert genome coordinates betweeen assemblies

    CrossMap is a program for convenient conversion of genome coordinates and genomeannotation files between assemblies (eg. lift from GRCh36/hg18 to GRCh37/hg19 or vice versa).It support file in BAM, SAM, BED, Wiggle, BigWig, GFF, GTF format.
    Downloads: 3 This Week
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  • 4
    TurboVNC

    TurboVNC

    High-speed, 3D-friendly, TightVNC-compatible remote desktop software

    TurboVNC is a high-performance, enterprise-quality version of VNC based on TightVNC, TigerVNC, and X.org. It contains a variant of Tight encoding that is tuned for maximum performance and compression with 3D applications (VirtualGL), video, and other image-intensive workloads. TurboVNC, in combination with VirtualGL, provides a complete solution for remotely displaying 3D applications with interactive performance. TurboVNC's high-speed encoding methods have been adopted by TigerVNC and...
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    Downloads: 134,976 This Week
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    MaxFEM

    MaxFEM

    Software for electromagnetic simulation

    MaxFem is an open software package for electromagnetic simulation by using finite element methods. The package can solve problems in electrostatics, direct current, magnetostatics and eddy-currents. Since version 0.4.0, MaxFEM requires Python 3. We have moved the installers to the MaxFEM website (see below). In order to improve MaxFEM, we will require you to fill out a simple form before downloading them.
    Downloads: 2 This Week
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  • 6
    tdsft

    tdsft

    TDSFT (Two-Dimensional Segmentation Fusion Tool)

    Given multiple segmentations related to the same tumor, statistical metrics could be exploited to determine the most reliable one, from there identified as ground truth. Numerous algorithms have been developed over time, but to date, there is no validated method for this procedure. Therefore, research is still active in this area. Two-Dimensional Segmentation Fusion Tool (TDSFT) is an open-source tool developed in MATLAB and distributed as a standalone application for MAC, Linux, and...
    Downloads: 0 This Week
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  • 7
    IF97

    IF97

    Water & steam properties Java library

    Steam tables for industrial use according to the international standard for the properties of water and steam, the IAPWS-IF97 formulation and the international standards for transport and other properties. Hummeling Engineering BV develops engineering software in the fields of thermodynamics, mechanics, hydrodynamics, and digital signal processing.
    Downloads: 1 This Week
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  • 8
    Free Version - Flow Cytometery FCS 2.0 and FCS 3.0 analysis compatible with BD, Coulter/Ortho, and Partec sample files. This implementation is platform independent and uses an apache-tomcat server, and runs all computers (Linux, PC, and Mac).
    Downloads: 0 This Week
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  • 9
    The Algorithms - C #

    The Algorithms - C #

    Collection of various algorithms in mathematics, machine learning

    TheAlgorithms/C is an open-source repository that provides implementations of classic algorithms and data structures written in the C programming language. The project is part of the larger “The Algorithms” initiative, which aims to create educational resources by implementing algorithms in multiple programming languages. Within the C repository, contributors implement algorithms from many areas of computer science including sorting, searching, graph processing, mathematics, machine...
    Downloads: 0 This Week
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  • 10

    pexm - JAGS module

    JAGS module for the piecewise exponential distribution

    This new module was built for users interested in a programming language similar to BUGS to fit a Bayesian model based on the piecewise exponential distribution. The module is an extension of the open-source program JAGS. The PE distribution is widely used in the fields of survival analysis and reliability. Currently, it can only be implemented in JAGS through methods to indirectly specify the likelihood based on the Poisson or Bernoulli probabilities. Our module provides a more...
    Downloads: 0 This Week
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  • 11
    UnityMol

    UnityMol

    Molecular viewer and prototyping framework

    !!! New website is https://unity.mol3d.tech and new releases/source code are now on Github : https://github.com/LBT-CNRS/UnityMol-Releases !!!! Implementation of a visualization prototype for molecular structures and networks using the Unity3D game engine. Implementation of numerous graphical methods as spheres, particle systems, bond, etc.. as well as our recent HyperBalls methodology (see: www.hyperballs.sf.net).
    Downloads: 9 This Week
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  • 12
    Symja Java Computer Algebra

    Symja Java Computer Algebra

    Symja - Java computer algebra language & symbolic math library

    Symja - computer algebra language and Java symbolic math library. Moved to https://github.com/axkr/symja_android_library. The Android App can be found at: https://github.com/axkr/symja-example
    Downloads: 11 This Week
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  • 13
    JSmol

    JSmol

    JavaScript-Based Molecular Viewer From Jmol

    JSmol is the extension of the Java-based molecular visualization applet Jmol (jmol.sourceforge.net) as an HTML5 JavaScript-only web app. It can be used in conjunction with the Java applet to provide an alternative to Java when the platform does not support that (iPhone/iPad) or does not support applets (Android). Used in conjunction with the Jmol JavaScript Object (http://wiki.jmol.org/index.php/Jmol_Javascript_Object), JSmol seamlessly offers alternatives to Java on these non-Applet...
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    Downloads: 16 This Week
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  • 14
    Hermes -- a set of libraries and tools for the support of scientific simulation and data archival.
    Downloads: 0 This Week
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  • 15
    AiBO+
    The project builds a new AI of AIBO from scratch. Currently, I have a white ERS-7 model, Rakka. Project is based on Boost, Qt, OpenCV, other 3rd party software and my own source codes.
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    Downloads: 3 This Week
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  • 16
    The Systems Biology Format Converter (SBFC) is a Java generic framework aiming to translate any systems biology model format into another. The SBFC Web Site providing detailed feature description and instructions for installing, using and developing new modules is: http://sbfc.sourceforge.net/ . Currently, SBFC allows the user to convert SBML models into the formats: BioPax, Matlab, Octave, XPP, DOT, and SBGN. Due to its modular design fast development and addition of new converters...
    Downloads: 0 This Week
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  • 17
    barcraft

    barcraft

    A simple QrCode / barcode generator in python

    A simple QrCode / barcode generator that you can also use from this website version : https://secret-guest.github.io/barcraft/ Interface made with pyQt5, made with a MSI installer with Inno setup
    Downloads: 3 This Week
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  • 18
    KDIS

    KDIS

    DIS(IEEE 1278.1) Fully Implemented in C++

    A complete open source implementation of DIS (Distributed Interactive Simulation) in C++. 1278.1 and 1278.1a are fully implemented including enumerations. Includes several utility classes to help with developing your DIS app. DIS 7 work is ongoing.
    Downloads: 1 This Week
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  • 19
    The RDP Classifier is a naive Bayesian classifier that can rapidly and accurately provides taxonomic assignments for bacterial and archaeal 16S rRNA sequences, fungal LSU and fungal ITS sequences, with confidence estimates for each assignment. More information and tutorials on how to install, use and retrain RDP Clasifier can be found on at https://github.com/rdpstaff/classifier and John Quensen's blog (https://john-quensen.com/). Citation: 1. Wang Q, Garrity GM, Tiedje JM, Cole JR....
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    Downloads: 62 This Week
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  • 20
    JAlma is Java Astronomical Almanac.
    Downloads: 0 This Week
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  • 21
    AminePlatform

    AminePlatform

    Amine is a Multi-Layer Platform for the dev. of Intelligent Systems

    Amine is an Artificial Intelligence Multi-Layer Java Open Source Platform dedicated to the development of various kinds of Intelligent Systems and Agents (Knowledge-Based, Ontology-Based, Conceptual Graph -CG- Based, NLP, Reasoning and Learning, Natural Language Processing, etc.). Ontology, KB can be created and manipulated with various processes. CG theory is used as the main knowledge representation language. Amine provides two languages: PROLOG+CG which extends PROLOG with CG and Amine...
    Downloads: 1 This Week
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  • 22
    ED Software project contains several programs used (mostly) for processing gas-phase electron diffraction (GED) experimental data.
    Downloads: 0 This Week
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  • 23
    TXM

    TXM

    Unicode XML TEI text analysis platform

    TXM is a free and open-source cross-platform Unicode & XML based text analysis environment and graphical client, supporting Windows, Linux and Mac OS X. It can also be used online as a J2EE standard compliant web portal (GWT based) with access control built in. DOWNLOAD LATEST VERSION OF TXM : http://textometrie.ens-lyon.fr/spip.php?rubrique61&lang=en TXM offers a comprehensive range of analysis tools (concordances, collocate search, frequency lists, etc.) based on the powerfull CQP...
    Downloads: 31 This Week
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  • 24

    Emgu CV

    Emgu CV is a cross platform .Net wrapper for OpenCV

    Emgu CV is a cross platform .Net wrapper to the OpenCV image processing library. Allowing OpenCV functions to be called from .NET compatible languages such as C#, VB, VC++, IronPython etc. The wrapper can be compiled in Mono and run on Windows, Linux, Mac OS X, iPhone, iPad and Android devices.
    Downloads: 38 This Week
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  • 25
    Project: Olympus

    Project: Olympus

    An Arduino-based Altitude and IMU Payload for Model Rocketry

    Project: Olympus is an engineering project that utilizes an Arduino Nano microcontroller to create an electronic payload that records altitude, g-forces experienced by the rocket, as well as roll rate. Included with the code is a 132 page Project Manual that takes you through the design and construction of the electronic payload. It also includes sections on the construction of the Estes Olympus rocket. A detailed code review of each section of code is included. We take a detailed look...
    Downloads: 0 This Week
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