Showing 1425 open source projects for "graph"

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  • 1

    Chordalysis

    Log-linear analysis (data modelling) for high-dimensional data

    ...However, due to its exponential nature, previous approaches did not allow scale-up to more than a dozen variables. We present here Chordalysis, a log-linear analysis method for big data. Chordalysis exploits recent discoveries in graph theory by representing complex models as compositions of triangular structures, also known as chordal graphs. Chordalysis makes it possible to discover the structure of datasets with thousands of variables on a standard desktop computer. Associated papers at ICDM 2013, ICDM 2014 and SDM 2015 can be found at http://www.francois-petitjean.com/Research/ YourKit is supporting Chordalysis open source project with its full-featured Java Profiler. ...
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  • 2
    Cell decomposition is one of the first applicable solution for path planning - robot path planning. The algorithm aims to find free areas (cells not occupied by obstacles) in the configuration space, and build a graph of adjacency for these cells.
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  • 3
    Process Control Daemon (PCD)
    PCD – Process Control Daemon is a light-weight system level process manager, designed for Embedded Linux based products. The PCD is used for starting the system in a synchronized manner, control and monitor processes and recover from crashes.
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  • 4
    We extend the Eclipse IDE with tools for development in Haskell, a functional programming language, providing support for a wide range of tools (compilers, interpreters, doc tools etc.) in a coherent, convenient and configurable environment.
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  • 5
    J3DWorkbench
    An extensible, real-time, 3D visualization, simulation, and game-design authoring tool. Integrates Java 3D and Eclipse RCP. Drag-&-Drop editing of a complex 3D scene graph. Fast world-building. Web delivery via Webstart or Applets.
    Downloads: 1 This Week
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  • 6
    WP Embed Articles

    WP Embed Articles

    Embed and share articles or posts from your wordpress blog

    Enables your wordpress blog posts to be sharable through an embedded interface as a service by http://embedarticles.com Embed Articles is a viral content distribution plugin that enables your posts and articles to be embedable to other websites through a creative embed button interface. By installing this plugin into your blog, your blog will be automatically be added with proper Open Graph Protocol metadatas which are being respected and parsed by most search engines like Google, Bing, and Yahoo. Another interesting and useful feature is the ability to add recommended relevant trending articles from ZergNet and various sources powered by embedarticles.com.
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  • 7
    JFCM
    Java implementation of Fuzzy Cognitive Maps (FCM). Implementation aims to be: small (and fast), simple to use, flexible enough to be used as a basis for other projects / libraries.
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  • 8

    Frndz Graph Plotter

    Graph plotting application developed by Mayank Shekhar

    This application can draw graphs of algebraic and trigonometric functions.
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  • 9
    Flexible Brain Graph Visualizer

    Flexible Brain Graph Visualizer

    Matlab code to visualise brain graphs from connectivity matrices

    This very configurable script allows you to plot a 3D (MNI space) visualisation of a brain graph, with edges represented by cylinders and vertices represented by spheres. To aid orientation, a cortical mesh can be added, as can convex hull outlines. The colouring and sizing scheme is fully configurable for both edges and vertices. You can see some example output in <http://www.ncbi.nlm.nih.gov/pubmed/22677149> <http://www.ncbi.nlm.nih.gov/pubmed/20541019> <http://www.ncbi.nlm.nih.gov/pubmed/24562717>
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  • 10
    We consider a problem of finding maximum weight subgraphs (MWS) that satisfy hard constraints in a weighted graph. The constraints specify the graph nodes that must belong to the solution as well as mutual exclusions of graph nodes, i.e., pairs of nodes that cannot belong to the same solution. Our main contribution is a novel inference approach for solving this problem in a sequential monte carlo (SMC) sampling framework. Usually in an SMC framework there is a natural ordering of the states of the samples. ...
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  • 11
    Biogranat (Molecular Biology Graph Visualisation and Analysis Tool) is a new tool for the analysis and visualisation of large datasets.
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  • 12

    Graph_DF_Layout

    A force directed graph layout algorithm implementation in Processing

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  • 13
    Prestashop Rating Review+Google Snippets

    Prestashop Rating Review+Google Snippets

    Product Review & Google Snippet SEO Boost module for Prestashop facili

    Product Review & Google Snippet SEO Boost module for Prestashop facilitates merchants to generate Rich snippets for user given rating and reviews in their website and include them in Search Engines to give convenient summary information about Product information in Search Engines with dynamic content on user ratings and reviews. This module integrates with the PrestaShop eCommerce Software and enables buyers or registered users or any visitors of the websites to give ratings and reviews...
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  • 14

    canticum

    Visual network music player

    A music organiser and player designed around the display of music tracks in network visualisations. Instead of organising content in trees and lists, canticum uses metadata to lay out and connect songs in a network graph.
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  • 15
    Shiny is a lightning fast, fully documented & by-far-easiest-to-use C/C++/Lua profiler with no extensive surgery. Results are smoothed & shown in run-time as a call-tree or sorted-by-time. Output also renderable as graphs in Ogre3D or your custom engine
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  • 16

    HRDAG

    Framework for Hierarchical Graph Decomposition

    This is a framework used to decompose hierarchical graphs, i.e.,graphs which were created from or contain a hierarchy of modules. Each module is reused several times in the hierarchy. This may be useful to reverse-engineer human constructs like electronic equipment, manufactured machines, or bureaucratic hierarchies; but also to decompose natural constructs like gene-relation or protein-relation nets.
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  • 17

    pfs_checker

    Perfect Forward Secrecy testing tool

    ...Each PFS implementation can be evaluated using criteria described in this blog:http://ogryb.blogspot.com/2014/05/seven-grades-of-perfect-forward-secrecy.html. The tool allows automating PFS testing for multiple websites described by a JSON configuration file. An html page with a visual graph and low level details will be generated by the tool.
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  • 18
    Graph-RAT
    Graph-RAT is a database abstraction layer designed to make it easy to use a large library of graph-analysis routines on a database as well as add new kinds of algorithms to data mining.
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  • 19

    xPyder PyMOL Plugin

    Analyze and visualize coupled residues and their networks in proteins

    xPyder is a PyMOL plugin to analyze and visualize on the 3D structure dynamical cross-correlation matrices (DCCM), linear mutual information (LMI), communication propensities (CP), intra- and inter-molecular interactions (e.g. PSN), and more, to produce highly customizable publication-quality images. xPyder identifies networks (using concepts from graph theory, such as hubs and shortest path searching), compares matrices and focuses the analysis on relevant information by filtering the data using a modular, user-expandable plugin system that takes advantage of structural and dynamical information, contributing to bridge the gap between dynamical and mechanical properties at the molecular level.
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  • 20

    nail_systems_biology

    NAIL is a toolset for network analysis in the life sciences

    The NAIL (Network Analysis and Inference Library) project is a set of tools for solving problems in the life sciences using network (graph) approaches. NAIL includes methods for creating networks, analysing and comparing networks, and for visualising or presenting the results. These methods are designed as self-contained platform-independent components which can be called either from another program, or from a command line. Modelling biological systems as networks (graphs) is becoming a common approach in the life sciences. ...
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  • 21

    Model Transformation Tools

    Bond-graph based modelling tools

    A set of tools for modelling dynamic physical systems using the bond-graph methodology and transforming these models into representations suitable for analysis, control and simulation. These tools use, and generate m files for, GNU Octave.
    Downloads: 1 This Week
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  • 22

    NGSbinningpytools

    Python tools for binning NGS scaffolds to various genomes.

    Next generation sequencing has opened new avenues for sequencing prokaryotes which were difficult or either impossible to culture. Now, it is possible to sequence all organisms present in a metagenomic community. However, a critical problem is to determine the host organism for each genomic fragment present in the dataset. This project provides the computational tools for assigning the organismal identity for each genomic scaffold in the given dataset. For more detailed documentation...
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  • 23
    js-graph-it is a JavaScript library that allows to represent graphs in html pages by linking blocks with connectors. Common html elements become blocks and connectors by using particular css classes, in a declarative fashion. Drag and drop is provided
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  • 24

    BasisViewer

    Browse and visualize your downloaded Basis Band B1 biometric data

    This application allows you to graph your Basis data in several ways and allows you to easily move across dates, plot mulitple attributes simultaneously, and understand trends and answer questions. This application assumes you've already run the BasisRetriever application and downloaded your metrics in csv format.
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  • 25

    EMFTrace

    Repository for dependencies between software design artefacts

    EMFTrace extends the EMFStore repository by elicitating dependencies between related models of different modeling and programming languages. The explicit recording and modeling of different types of dependencies as traceability links shall support evolutionary changes by impact analysis, early evaluation of quality flaws, and better comprehension. It is an open source project to support the practical application of research results regarding development methods for evolution of software...
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