Search Results for "data quality" - Page 25
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Showing 888 open source projects for "data quality"
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ARDEN
Specificity Control for Read Alignments Using an Artificial Reference
We introduce ARDEN (Artificial Reference Driven Estimation of false positives in NGS data), a novel benchmark that estimates error rates based on real experimental reads and an additionally generated artificial reference genome. It allows the computation of error rates specifically for a dataset and the construction of a ROC-curve. Thereby, it can be used to optimize parameters for read mappers, to select read mappers for a specific problem or also to filter alignments based on quality estimation. -
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JARep is a reporting tool for application performance data, extracted from a performance measuring tool like JAMon API. The data is then stored in a database. Via a webapp or a Swing application you can view the performance over time. See SVN source.
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Weibull-based reliability toolkit for R
R package for Weibull analysis on (life-)time observations.
This is a small R package for doing Weibull-based reliability analysis. This R package is now obsolete and has been superseded by 'project Abernethy' on http://r-forge.r-project.org/projects/abernethy/. -
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This plugin allow to visualize several e.g. gene expression values simultanously using pie charts. * Please cite http://www.biomedcentral.com/1752-0509/4/164 *
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E-Mail monitoring, benchmarking and load testing tool with integrated web UI.
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NaRIBaS
Unix-based preparation and analysis toolbox for molecular simulations
Unix-based preparation and analysis toolbox for Nanomaterials and Room Temperature Ionic Liquids in Bulk and Slab using bash scripts, Gromacs tools and Matlab functions. NaRIBaS provides a framework that decouples user input parameter and terminal based command lines. NaRIBaS does not replace a simulation software and specific analysis tools like Gromacs, but it allows iterative repetition of tasks while changing specific input parameter. The toolbox is to be understood as a scripting... -
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Toolsverse ETL Framework
Open source Extract Transform Load engine written in Java
...It includes executables for all major platforms and can be easily integrated into other applications. Key Features: * embeddable, open source and free * fast and scalable * uses target database features to do transformations and loads * manual and automatic data mapping * data streaming * bulk data loads * data quality features using SQL, JavaScript? and regex * data transformations Requirements * Java 1.6 and up * At least 4 MB of RAM New in 3.2 (01/18/2013) * Improved auto-update functionality * Bug fixes -
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De Novo Assembly From Clinical Trials
Produce high quality de novo assembly to identify pathogens.
UPDATES/ NOTICES WILL BE POSTED TO THE DISCUSSION TAB: http://sourceforge.net/p/denovoassembly/discussion/general/ Given a clinical sample, *Produce a high quality de novo assembly. *Use this assembly to identify pathogens present in the sample. *Determine pathogen significance. Data: Human Metagenome: ftp.ll.mit.edu/outgoing/BCD2/abscess.tar.gz ftp.ll.mit.edu/outgoing/BCD2/nicaragua.tar.gz ftp.ll.mit.edu/outgoing/BCD2/oral_diseased.tar.gz ftp.ll.mit.edu/outgoing/BCD2/oral_healthy.tar.gz ftp.ll.mit.edu/outgoing/BCD2/palm.tar.gz Non-Human Metagenome: ftp.ll.mit.edu/outgoing/environmental1.tar.gz ftp.ll.mit.edu/outgoing/environmental2.tar.gz ftp.ll.mit.edu/outgoing/environmental3.tar.gz ftp.ll.mit.edu/outgoing/BCD2/soil.tar.gz -
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Protocol Emulator is a free Java-based application intended for emulation of a protocol behavior. At present Protocol Emulator allows emulation of plain text protocols only.
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Stop Cyber Threats with VM-Series Next-Gen Firewall on AzureGain integrated visibility across all traffic in a single pass. Deploy Palo Alto Networks VM-Series to determine application identity and content while automating security policy updates via rich APIs.
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tap4j
Test Anything Protocol for Java
tap4J is a Java implementation of the Test Anything Protocol. This protocol lets you standardize the output of your test execution. This way a producer outputs a TAP result file that can be read by a TAP consumer. -
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Jensor is a light-weight, low-overhead Java Profiler built using Java BCI. Jensor provides innovative analysis modules like JVM Replay, Pattern Analysis and Tagging Engine for technical as well as business analysis based on the same underlying data.
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LVFTools
Toolset for LVF lossless video format
LVF (lossless video file) is a very simple and speed lossless video format specially created to work with bitmap output of 3DSMax(R)-like renderers, and store the high definition output in the form of one lossless compressed large videofile. User can easy split and merge these files without any information loss on a very high speed. Even if you need just one frame you'll got it with one move with original rendered quality. This project holds the full LVF toolset. -
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maintqar
Keep track of car maintenance
maintqar is a little application to help car users to keep track of maintenance of cars and associated costs. For now maintqar includes how much fuel has been used and calculates consumtion. Future versions might also include info about servicing. This is all alpha quality for now! -
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WavePro Shield
Arduino WavePro Shield
The Arduino WavePro Shield is a shield for the Arduino which contains a dsPIC for audio generation and an SD card for audio storage. The dsPIC reads WAV direct from the SD card and plays them at up to 48KHz 16 bit stereo. The dsPIC also acts as a proxy to the SD card to allow file-based operations to be performed by the Arduino. A packet based SPI protocol allows the transfer of data and commands between the Arduino and the WavePro Shield. -
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DATA Gen™
DATA Gen™ - Test Data Generator to generate realistic test data.
DATA Gen™ Test Data Generator offers facilities to automate the task of creating test data for new or existing data bases. It helps lower the programming effort required, while reducing manual test data generation errors and the ripple effect that they cause on production systems, users and maintenance. -
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With crfile you can generate files of a specified length filled with random bytes. These files can be used to test software e.g. a network protocol.
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AQAM
Experimental automated quality test for file format conversions.
AQAM is an Automated Quality Assurance Mechanism for testing the quality of the conversion of Microsoft Word (.doc) format files to OpenDocument (ODT) format. It is an ongoing research and development project being conducted by the National Archives of Australia. -
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Xi Spectrum Viewer
Mass Spectrum Viewer Tool
To overcome current limitations in published MS data accessibility, we introduce a browser-based spectrum viewer that aims to allow exploration of alternative interpretations for MS spectra and additionally: can be operated by non-specialists, is open source, can be integrated into other software, gives appropriate publication-quality output. Spectrum Viewer is implemented totally on the client side using XHTML for menus and dialogs, SVG for spectrum and peptide display, and Javascript to drive functionality. ... -
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MyCA - Easy Self-Signed SSL
PHP-based app to create your own CA and sign SSL certs in seconds!
MyCA is a very simple tool written in PHP that uses the phpseclib library to create certificate authorities (CAs) and sign SSL certificates with them. This tool was written primarily for myself because I wanted: 1. A free, web-based tool to create and manage my testing and development SSL certificates. 2. A tool that would not take me more than 60 seconds to log in, generate, and download a new certificate. 3. A single password to log into the UI and manage multiple CAs. 4. No... -
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Chronogram Editor
Build digital chronogram quickly and easily
Chronogram Editor software helps you to quickly build chronograms thanks to its intuitive graphical interface. It is developped in Java and is compatible with any operating system implementing a Java Runtime Environnment. -
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SERVOS Professional
SERVOS is an open source Linux-based operating system.
...SERVOS modules are specially designed to be much smaller than any other compressed packages available nowadays, and through the use of a Monolithic Kernel Design, speed of decompression remains usually faster than reading the full data from disk. SERVOS aims to provide a less investment with more quality and features. -
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Youtube-2-mp3
Converts & Downloads YouTube audio to mp3
...Youtube-2-mp3 converts the audio-track of your video-file to mp3. The conversion hardly takes 10-20 seconds , the only thing you need is a YouTube URL. The conversion will be performed in a high quality mode with a bitrate of at least 128 kBit/s. Youtube-2-mp3 also monitors the clipboard data as soon as you copy any YouTube link it will automatically add it to the download list. -
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SarBox
SarBox helps user to parse or analyze sar data
The software program (SarBox) parses and analyzes SAR data in charts or text formats. SAR is cumulative activity counters in the operating system. It is the most comprehensive command which helps to monitor performance of various Linux / Solaris subsystems (CPU, Memory, I/O, Disk, Network, etc) all in same log. This makes it difficult to analyze since every counter data is dumped into the log file. SarBox helps to analyze this log file and present data in graphical charts or text... -
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aim is to provide support for monitoring system behaviour through dynamic analysis, and for analysing and modeling this data for a better understanding of system behaviour and for test automation
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mubiomics
Scripts for processing next-gen sequencing data
A set of scripts (mostly python) for processing reads generated by the Roche 454 or Illumina next-gen sequencing platforms. Included are quality control, read demultiplexing and microbiome characterisation scripts for use with usearch, pplacer and RDP classifier. The package was used to produce the data presented in Smith et al. (2012) "The Cervical Microbiome over 7 Years and a Comparison of Methods for its Characterization".
