Search Results for "trinityrnaseq_r2013-02-25" - Page 2
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Showing 287 open source projects for "trinityrnaseq_r2013-02-25"
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PLEKv2
PLEKv2: predicting lncRNAs and mRNAs
... Coding_Net_kmer6_orf_Arabidopsis.h5.bz2 USAGE Python PLEK2.py -i fasta_file -m model(ve: vertebrate , pl: plant) Examples: $ python PLEK2.py -i test.fasta -m ve Aimin Li, Haotian Zhou, Siqi Xiong, Junhuai Li, Saurav Mallik, Rong Fei, Yajun Liu, Hongfang Zhou, Xiaofan Wang, Xinhong Hei, Lei Wang. PLEKv2: predicting lncRNAs and mRNAs based on intrinsic sequence features and the coding-net model. BMC Genomics 2024, 25(1):756. https://doi.org/10.1186/s12864-024-10662-y -
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PuppEX Noble/Bookworm/Jammy/Slack 64bit
PuppEX Noble/Bookworm/Slack/Jammy are remasters of Puppy Linux
ABOUT PuppEX Noble64/Jammy64 - Mate/KDE/ROX Build 241031/241029/241109 is made by me. Kernel 6.11.5/6.11.7-exton is used. Three PuppEX derivatives are built using the Bookworm Build Script. COMPATIBLE WITH Slackware 15.0, Debian 12 and Ubuntu 24.04/22.04 PuppEX Noble64 is compatible with Ubuntu 24.04. PuppEX Slack64 is compatible with Slackware 15.0. PuppEX Jammy64 with Ubuntu 22.04. PuppEX Bookworm64 is compatible with Debian 12. The Noble64 ISO is of 930/1060/939 MB. The Slack64... -
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BioXTAS RAW
Processing and analysis of Small Angle X-ray Scattering (SAXS) data.
BioXTAS RAW is a program for analysis of Small-Angle X-ray Scattering (SAXS) data. The software enables: creation of 1D scattering profiles from 2D detector images, standard data operations such as averaging and subtraction, analysis of radius of gyration (Rg) and molecular weight, and advanced analysis using GNOM and DAMMIF as well as electron density reconstructions using DENSS. It also allows easy processing of inline SEC-SAXS data and data deconvolution using the evolving factor analysis... -
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Floreant POS
Opensource Enterprise Grade Restaurant POS
Enterprise Grade Point of Sale application for QSR, Casual Dine-In, Fine Dine-In, Cafe and Retail. Established in 2008 Floreant POS has powered 30,000 restaurants in 25 countries around the world. It can run on single or multiple terminals and manage new order, visualize tables, manage kitchen and produce advanced reports. Floreant POS is initiated and maintained by OROCUBE LLC, USA (https://orocube.com) and released under MRPL 1.2, a variant of Mozilla Public License 1.1. http... -
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MathMod
MathMod is a mathematical modeling software
MathMod is a portable interactive plotting and graphing program for Windows, Linux, MacOSX and many other platforms. MathMod allows to plot 3D mathematical surfaces, described by implicit or parametric equations, and offers a very large database of model samples that can be generated with it. It's Free and Open Source. Change-log for MathMod-12.0 (25/09/2024) 1) MathMod support for Android and IOS platforms (MathMod on Google's PlayStore and Apple's AppStore) 2) GUI improvement to support... -
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Senpai Respin ParrotOS
ParrotOS for daily use and only with tools for privacy, no hacking.
Two respin created with ParrotOS Home and MX-Linux only with privacy tools. One with the base of MX-Linux Mate 23.2 and the kernel and core of ParrotOS according to the installation script provided by ParrotOS developers for Debian derivatives. For more details on my Blog: https://sourceforge.net/p/senpai-respins/blog/2024/02/senpai-respin-of-mx-mate-232-with-parrotos-60/ And another one with the base of ParrotOS 6.0 and most of the MX Tools, which are what differentiates MX from other... -
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Senpai Respin MX-LxQt
Respin of MX-Linux with LxQt/Openbox in its 32 and 64 bits versions.
Respin of MX-Linux with LxQt/Openbox in its 32 and 64 bits versions. For more details on my Blog: https://sourceforge.net/p/senpai-respins/blog/2024/02/senpai-respin-only-with-lxqtopenbox-mx-232/ This would be impossible without the magnificent MX-Linux distribution, https://mxlinux.org/, the great tools it provides and the selfless help of its developers and users of the MX-Linux forum, https://forum.mxlinux.org/. Respin post in the MX forum: https://forum.mxlinux.org/viewtopic.php... -
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Snap Camera Server
Self hosted Docker server to use Snap Camera after the shutdown.
Snap Camera Server is an alternative self hosted solution for Snapcamera. It will let you continue to use Snapcamera with all Snapchat filters after the shutdown on January 25, 2023. ✔️ No previously backed up files or third party server required. ✔️ Access all Snap Lenses from Snapchat without restrictions. ✔️ Import Lenses from local application cache e.g. AppData\Local\Snap\Snap Camera\cache\lenses. ✔️ All files will be stored inside a Docker Volume (e.g. on your local machine... -
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LoopAuditioneer
Software for loop and cue handling in .wav files.
Since 2024-02-28 development of LoopAuditioneer has moved to GitHub. Please go to https://github.com/GrandOrgue/LoopAuditioneer for recent updates and releases. -
Red Hat Ansible Automation Platform on Microsoft AzureDeploy Red Hat Ansible Automation Platform on Microsoft Azure for a strategic automation solution that allows you to orchestrate, govern and operationalize your Azure environment.
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PLEK
predictor of long non-coding RNAs and mRNAs based on k-mer scheme
... -isrmtempfile 0_or_1 Examples: 1. $ python PLEK.py -fasta PLEK_test.fa -out predicted -thread 10 2. $ python PLEK.py -fasta PLEK_test.fa -out predicted -thread 10 -minlength 150 We upgraded PLEK to PLEKv2.: https://doi.org/10.1186/s12864-024-10662-y Aimin Li, Haotian Zhou, Siqi Xiong, et al. PLEKv2: predicting lncRNAs and mRNAs based on intrinsic sequence features and the coding-net model. BMC Genomics 2024, 25(1):756. -
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Filt8- v3.6 alerts for WSJT-X FT8
Alert and filter QSO for WSJT-X FT8 FT4
Filt8 - v3.6 release - Requires Python 3.x (3.10 or higher on Mac) Scrollable maps for small screens State data as of Feb 25, 2024. Map saves settings. Map features: filter by band, click to Lookup. Offline Maps to show station grid locations as you decode them in real-time (Check out js8mapper project on https://sourceforge.net/projects/js8map/ for this same option for JS8Call) Map feature allows filtering by band, listings by callsigns or grids, and callsign lookups via QRZ... -
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Pumpfun Sniper Bot
Raydium + Pumpfun sniper bot with user-friendly GUI interface. Free
This bot is totally free, and its open-source code is available for public use. It was originally developed by me and a friend for personal purposes, but we decided to share it with everyone. The bot comes with an extremely user-friendly interface. -
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RebeccaBlackOS
Fan Made RebeccaBlackOS. VT-less Linux With Wayland.
I got the idea to name a Linux distribution after my favorite celebrity after I saw some earlier Linux distributions named after celebrities, and also this KDE blog post. http://ivan.fomentgroup.org/blog/2011/05/02/splash-screens-and-qml/ And then I thought, she deserves the free promo too. This is amongst the first live distributions to provide a Wayland server. VTs are disabled in the kernel. While 32 bit and 64 bit x86 ISOs used to be provided in each build, the latest builds are 64... -
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SPINA
Structure parameter inference approach for endocrine feedback control
SPINA is software for determining constant structure parameters of endocrine feedback control systems from hormone levels obtained in vivo. The first version of this cybernetic approach allows for evaluating the functional status of the thyroid gland, i.e. thyroid's secretory capacity (GT or SPINA-GT) and sum activity of peripheral deiodinases (GD or SPINA-GD). A second version has been developed for insulin-glucose homeostasis. It delivers the secretory capacity of pancreatic beta... -
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Dolphin Data Recovery Assistant Pro
one software-only data recovery assisting tool
... Pro. contains 6 modules: 01: Invalid Files; 02: Extension; 03: N.S Image; 04: 2258XT; 05: Database Repair; 06: Raid Analysis; 07: File Rename. Each module is very helpful for data recovery success! Free to use for the first two months!Full Functions, Try it now! More info here->https://www.dolphindatalab.com/product/dolphin-data-recovery-assistant-pro/ -
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Custom AlmaLinux 9.4 KDE Live ISO
AlmaLinux 9.4 KDE LiveISO with extra preconfigured repos and packages
... ALMALINUX OS AND FROM THIRD PARTIES. ➡️ What you need to know when using my custom AlmaLinux 9.4 KDE ISO: https://ludditus.com/2024/07/25/what-you-need-to-know-when-using-my-custom-almalinux-kde-iso/ -
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Tria Sistema Operatiu
Helps you find, download & burn the best Operating System for any PC
Tria O.S. detects hard & soft specs of the PC where you run it, you can load this info or specify it manually to let the program inform you what would be the best operating system for a specific PC, with the specified hardware, and then see the difference by adding RAM, a SSD hard drive, changing the graphics card ... etc. REQUIREMENTS: For Linux, you need GAMBAS 3.3 or later, so you will have to install the gambas3 package before installing. 90's EDITION needs 160 MB (192 MB on... -
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Moliom Solana Bot
Raydium + Pumpfun sniper bot with user-friendly GUI interface. Free
!This bot is completely Free. The open source code available! This bot was developed by me and a friend. Initially we did it for ourselves, but later decided to give in free use to all people. The bot also has a very convenient and understandable for all interface -
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cppcrypto
C++ cryptographic library (modern hash functions, ciphers, KDFs)
cppcrypto provides optimized implementations of cryptographic primitives. Hash functions: BLAKE, BLAKE2, Echo, Esch, Groestl, JH, Kupyna, MD5, SHA-1, SHA-2, SHA-3, SHAKE, Skein, SM3, Streebog, Whirlpool. Block ciphers: Anubis, Aria, Camellia, CAST-256, Kalyna, Kuznyechik, Mars, Serpent, Simon, SM4, Speck, Threefish, Twofish, and Rijndael (AES) with all block/key sizes. Stream ciphers: HC-128, HC-256, Salsa20, XSalsa20, ChaCha, XChaCha. Encryption modes: CBC, CTR. AEAD modes:... -
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Linpac
Amateur Radio AX.25 chat and PBBS program using Linux's AX.25 stack
A modular console-oriented amateur radio AX.25 keyboard to keyboard chat and PBBS program using Linux's AX.25 stack. Includes support for multiple concurrent connected sessions, a unconnected (UI) message screen, and an automated packet message client -
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3D Printer ABL Mesh Display
Display the mesh data from an ABL enabled 3D printer
A number of 3D printers do not allow the user to see the data generated by the automatic bed levelling process. This application running on a Windows PC connects to the printer using a USB cable (A to micro) and sends the necessary gcode commands to run the bed levelling process. The printer bed is probed following which the application shows a matrix with colours to indicate the measurements to provide a quick indication of how level the bed is. (4x4 or 5x5 matrix) Colours used: Red... -
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SimThyr
A simulation program for thyroid homeostasis.
SimThyr is a continuous simulation program for the human pituitary-thyroid feedback control system. Applications of this program cover research, including development of hypotheses, and education of students in biology and medicine, nurses and patients. -
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Kimai - Time Tracking Software
Time-Tracking for companies and teams with up to 250+ users
Kimai is web based software that tracks work time, and classifies it. It tracks time and prints out a summary of your activities on demand. Yearly, monthly, daily, by customer, by project, by action. FETCH THE LATEST DOWNLOAD FROM GITHUB: https://github.com/kimai/kimai/releases Record expenses and print customizable invoices in different formats. For further information visit: - https://www.kimai.org - https://www.kimai.cloud - https://github.com/kimai/kimai -
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Senpai MX-Parrot Respin Plymouth
Plymouth for the Senpai MX-Parrot Respin
...) and the KMS driver. Plymouth is bundled with an initial ramdisk which allows it to run before the file system is mounted. Senpai MX-Parrot Respin is a personal respin by senpai99 & based on his Respin of MX-23.2-AHS "Libretto" with Mate, installing on it ParrotOS 6.0. For info visit his blog at https://sourceforge.net/p/senpai-respins/blog/2024/02/senpai-respin-of-mx-mate-232-with-parrotos. You can download his respin of MX Linux & Parrot OS at https://sourceforge.net/projects/senpai-respin-parrot -
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pj-net-tools
Pure Java Network Tools
Pure Java Network Tools. Free portable cross-platform. Include: 01) ICMP-ping, 02) ICMP-traceroute, 03) DNS-check resolver, 04) Parallel Host TCP-scanner, 05) IP-calculator, 06) Syslog-server, 07) Telnet-client, 08) Local ARP-cache request, 09) Parallel Network Ping-Scanner, 10) Snmp-Get concrete value utility. 11) Parallel ICMP flood utility. 12) Parallel UDP flood utility. 13) TFTP-server. 14) NTP-server. 15) Host TCP-ping. 16) SNMP-MRTG traffic monitor. 17...