Showing 2004 open source projects for "hash-linux"

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    MongoDB Atlas runs apps anywhere

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  • 1
    pydna

    pydna

    Clone with Python! Data structures for double stranded DNA

    Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning. Planning genetic constructs with many parts and assembly steps, such as recombinant metabolic pathways, are often difficult to properly document as is evident from the poor state of documentation in the scientific literature. The pydna python package provide a human-readable formal description of cloning and genetic assembly strategies in Python which...
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  • 2
    CoordinateTransformations.jl

    CoordinateTransformations.jl

    A fresh approach to coordinate transformations

    CoordinateTransformations is a Julia package to manage simple or complex networks of coordinate system transformations. Transformations can be easily applied, inverted, composed, and differentiated (both with respect to the input coordinates and with respect to transformation parameters such as rotation angle). Transformations are designed to be light-weight and efficient enough for, e.g., real-time graphical applications, while support for both explicit and automatic differentiation makes...
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  • 3
    ggstatsplot

    ggstatsplot

    Enhancing {ggplot2} plots with statistical analysis

    {ggstatsplot} is an extension of {ggplot2} package for creating graphics with details from statistical tests included in the information-rich plots themselves. In a typical exploratory data analysis workflow, data visualization and statistical modeling are two different phases: visualization informs modeling, and modeling in its turn can suggest a different visualization method, and so on and so forth. Bayesian hypothesis-testing. The central idea of {ggstatsplot} is simple: combine these...
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  • 4
    Globe.GL

    Globe.GL

    UI component for Globe Data Visualization using ThreeJS/WebGL

    Globe.GL is a web component for building interactive three-dimensional globe visualizations in the browser. It uses Three.js and WebGL to render geographic data on a spherical projection. Developers can display points, arcs, polygons, paths, heatmaps, tiles, particles, rings, labels, and custom 3D objects. Multiple visualization layers can be combined into a single globe. The component also provides controls for the globe surface, atmosphere, camera, animation, and rendering behavior. It is...
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  • 5
    force-graph

    force-graph

    Force-directed graph rendered on HTML5 canvas

    Force Graph is a JavaScript component for rendering interactive force-directed graphs on an HTML5 canvas. It uses d3-force as its physics engine to calculate node positions through iterative simulation. Developers can load graph structures containing nodes and links and update the data dynamically. Users can zoom, pan, drag nodes, and interact with nodes or links through hover and click events. Nodes can contain text, images, custom shapes, colors, and configurable labels. Links can display...
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  • 6
    Profile Summary

    Profile Summary

    Tool for visualizing GitHub profiles

    Profile Summary for GitHub is a web application for turning a public GitHub account into a more visual overview of its development activity. It uses the GitHub API to collect profile and repository information and present it as summary graphics and statistics. Its visualizations include repository distribution by programming language and commit distribution by language. Users can generate summaries for GitHub usernames through the web interface. The project can also be self-hosted and...
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  • 7
    vim‑sneak

    vim‑sneak

    The missing motion for Vim

    vim‑sneak is a minimalist yet powerful navigation plugin for Vim, designed to jump to any location specified by two characters. It maintains compatibility with Vim's operators, macros, visual mode, repeat (.), and supports multibyte text. It provides intuitive highlights that disappear once the jump is completed. Sneak has <Plug> mappings for f and t 1-character-sneak. These mappings do not invoke label-mode, even if you have it enabled. Highlights matches in the direction of your search....
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  • 8
    react-globe.gl

    react-globe.gl

    React component for Globe Data Visualization using ThreeJS/WebGL

    react-globe.gl provides React bindings for creating interactive three-dimensional globe visualizations with Globe.GL. It exposes globe configuration and data visualization layers through React component properties. Applications can render points, arcs, polygons, paths, heatmaps, tiles, particles, rings, labels, HTML markers, and custom 3D objects. Three.js and WebGL handle the underlying three-dimensional rendering. Developers can combine several geographic layers and update them through...
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  • 9
    ThreeJS Globe Visualization

    ThreeJS Globe Visualization

    WebGL Globe Data Visualization as a ThreeJS reusable 3D object

    Three Globe is a Three.js class for creating geographic data visualizations on interactive 3D globes. It is intended for developers who want globe visualization functionality directly inside an existing Three.js scene. Geographic information can be rendered through independent layers for points, arcs, polygons, paths, heatmaps, hexagons, tiles, particles, and other objects. The spherical projection makes it suitable for global spatial and network datasets. Developers retain access to the...
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  • 10
    React Force Graph

    React Force Graph

    React component for 2D, 3D, VR and AR force directed graphs

    React Force Graph is a collection of React components for displaying force-directed graph data across 2D, 3D, virtual reality, and augmented reality environments. It provides separate packages with consistent APIs for each visualization mode. Canvas and WebGL rendering are combined with force-based physics for dynamic graph layouts. Users can zoom, pan, drag nodes, and respond to hover or click interactions. Developers can customize node shapes, text, images, link styles, directional...
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  • 11
    3D Force-Directed Graph

    3D Force-Directed Graph

    3D force-directed graph component using ThreeJS/WebGL

    3D Force-Directed Graph is a web component for visualizing graph data in an interactive three-dimensional environment. It uses Three.js and WebGL for rendering while force simulation engines calculate node positions dynamically. Developers can customize nodes, links, labels, geometry, colors, directional arrows, particles, and other visual properties. Users can interact with graphs through dragging, clicking, selection, camera movement, and focus controls. The library supports dynamic data...
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  • 12
    forecast

    forecast

    Forecasting Functions for Time Series and Linear Models

    The forecast package is a comprehensive R package for time series analysis and forecasting. It provides functions for building, assessing, and using univariate forecasting models (e.g. ARIMA, exponential smoothing, etc.), tools for automatic model selection, diagnostics, plotting, forecasting future values, etc. It's widely used in statistics, economics, business forecasting, environmental science, etc. Exponential smoothing state space models (ETS) including seasonal components. Residual...
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  • 13
    Blueprint MCP

    Blueprint MCP

    Diagram generation for understanding codebases and system architecture

    Blueprint MCP is a modular control plane designed for managing and orchestrating multiple game-server clusters in real time, giving operators fine-grained control over scaling, configuration, and deployment workflows across distributed infrastructure. It provides a central management REST API and dashboard where teams can view cluster health, adjust instance fleets, set auto-scaling policies, and monitor usage metrics in a unified interface. Blueprint-MCP also supports templated server...
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  • 14
    ImplicitGlobalGrid.jl

    ImplicitGlobalGrid.jl

    Distributed parallelization of stencil-based GPU and CPU applications

    ImplicitGlobalGrid is an outcome of a collaboration of the Swiss National Supercomputing Centre, ETH Zurich (Dr. Samuel Omlin) with Stanford University (Dr. Ludovic Räss) and the Swiss Geocomputing Centre (Prof. Yuri Podladchikov). It renders the distributed parallelization of stencil-based GPU and CPU applications on a regular staggered grid almost trivial and enables close to ideal weak scaling of real-world applications on thousands of GPUs [1, 2, 3]. ImplicitGlobalGrid relies on the...
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  • 15
    gganimate

    gganimate

    A Grammar of Animated Graphics

    gganimate extends the grammar of graphics as implemented by ggplot2 to include the description of animation. It does this by providing a range of new grammar classes that can be added to the plot object in order to customize how it should change with time. Here we take a simple boxplot of fuel consumption as a function of cylinders and let it transition between the number of gears available in the cars. As this is a discrete split (gear being best described as an ordered factor) we use...
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  • 16
    Sweetviz

    Sweetviz

    Visualize and compare datasets, target values and associations

    Sweetviz is an open-source Python library that generates beautiful, high-density visualizations to kickstart EDA (Exploratory Data Analysis) with just two lines of code. Output is a fully self-contained HTML application. The system is built around quickly visualizing target values and comparing datasets. Its goal is to help quick analysis of target characteristics, training vs testing data, and other such data characterization tasks. Shows how a target value (e.g. "Survived" in the Titanic...
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  • 17
    SQLPad

    SQLPad

    Web-based SQL editor run in your own private cloud

    A web app for writing and running SQL queries and visualizing the results. Supports Postgres, MySQL, SQL Server, ClickHouse, Crate, Vertica, Trino, Presto, SAP HANA, Cassandra, Snowflake, Google BigQuery, SQLite, TiDB, and many more via ODBC. The docker image runs on port 3000 and uses /var/lib/sqlpad for the embedded database directory. latest tag is continuously built from latest commit in repo. Only use that if you want to live on the edge, otherwise use specific version tags to ensure...
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  • 18
    city-roads

    city-roads

    Visualization of all roads within any city

    city-roads is a data visualization and mapping project that renders street networks of cities as vector paths, offering an interactive, zoomable experience that highlights how cities are stitched together by their road infrastructure. It typically fetches open map data (such as from OpenStreetMap) and then processes that data into geometry suited for rendering in the browser, allowing users to explore intricate road layouts at various scales. The visual style often abstracts away labels and...
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  • 19
    pprof

    pprof

    pprof is a tool for visualization and analysis of profiling data

    pprof is a profiling visualization and analysis tool that ingests profiles in the profile.proto format and generates human-readable and graph-based reports. It supports multiple profile types (CPU, heap, allocations, contention, etc.) and can present data as text tables, call graphs (via Graphviz/dot), flame graphs, and interactive web UIs. The tool helps developers find hot paths, quantify resource usage, and compare profiles across runs to validate performance changes. It is widely used in...
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  • 20
    see

    see

    Visualisation toolbox for beautiful and publication-ready figures

    see is an R package that serves as the visualization component of the easystats ecosystem, providing plotting utilities to produce publication-ready visualizations of statistical model parameters, diagnostics, predictions, and performance metrics. It works in conjunction with other easystats packages (such as parameters, performance, modelbased, bayestestR, etc.) to convert model outputs or summary objects into visual forms (dot-and-whisker plots, diagnostic plots, residual plots, etc.). It...
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  • 21
    Data Formulator

    Data Formulator

    Create rich visualizations with AI

    To create rich visualizations, data analysts often need to iterate back and forth among data processing and chart specification to achieve their goals. To achieve this, analysts need not only proficiency in data transformation and visualization tools but also efforts to manage the branching history consisting of many different versions of data and charts. Recent LLM-powered AI systems have greatly improved visualization authoring experiences, for example by mitigating manual data...
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  • 22
    Chromatone

    Chromatone

    Chromatone is a digital garden of visual music theory

    Cards and short overviews on the physics and physiology of vision and hearing and their intersection at visual music research, exploration, practice, and self-expression. Useful tools to have in the pocket like a pack of interactive cards to learn and use in everyday music practice. These are open source web experiments with different aspects of sound and color. Chromatone is an open source research and design project to explore, develop and implement the scientific way of visual music...
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  • 23
    nb-clean

    nb-clean

    Clean Jupyter notebooks of outputs, metadata, and empty cells

    nb-clean cleans Jupyter notebooks of cell execution counts, metadata, outputs, and (optionally) empty cells, preparing them for committing to version control. It provides both a Git filter and pre-commit hook to automatically clean notebooks before they're staged, and can also be used with other version control systems, as a command line tool, and as a Python library. It can determine if a notebook is clean or not, which can be used as a check in your continuous integration pipelines....
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  • 24
    ParallelStencil.jl

    ParallelStencil.jl

    Package for writing high-level code for parallel stencil computations

    ParallelStencil empowers domain scientists to write architecture-agnostic high-level code for parallel high-performance stencil computations on GPUs and CPUs. Performance similar to CUDA C / HIP can be achieved, which is typically a large improvement over the performance reached when using only CUDA.jl or AMDGPU.jl GPU Array programming. For example, a 2-D shallow ice solver presented at JuliaCon 2020 [1] achieved a nearly 20 times better performance than a corresponding GPU Array...
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  • 25
    ReinforcementLearning.jl

    ReinforcementLearning.jl

    A reinforcement learning package for Julia

    A collection of tools for doing reinforcement learning research in Julia. Provide elaborately designed components and interfaces to help users implement new algorithms. Make it easy for new users to run benchmark experiments, compare different algorithms, and evaluate and diagnose agents. Facilitate reproducibility from traditional tabular methods to modern deep reinforcement learning algorithms. Make it easy for new users to run benchmark experiments, compare different algorithms, and...
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